Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm23735-201ENSMUST00000082551 134 ntBASIC0.67□□□□□ -2.3
Lire1P11260 Gm23412-201ENSMUST00000083017 107 ntBASIC0.67□□□□□ -2.3
Lire1P11260 Gm14307-201ENSMUST00000118930 291 ntBASIC0.66□□□□□ -2.3
Lire1P11260 Gm14297-201ENSMUST00000129110 291 ntBASIC0.66□□□□□ -2.3
Lire1P11260 Gm16362-201ENSMUST00000135189 214 ntBASIC0.66□□□□□ -2.3
Lire1P11260 Gm23182-201ENSMUST00000158688 135 ntBASIC0.66□□□□□ -2.3
Lire1P11260 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.66□□□□□ -2.3
Lire1P11260 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.66□□□□□ -2.3
Lire1P11260 Gm37997-201ENSMUST00000193515 267 ntBASIC0.66□□□□□ -2.3
Lire1P11260 Mir3535-201ENSMUST00000197651 147 ntBASIC0.66□□□□□ -2.3
Lire1P11260 Gm45508-201ENSMUST00000209298 299 ntBASIC0.66□□□□□ -2.3
Lire1P11260 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.66□□□□□ -2.3
Lire1P11260 Gm22021-201ENSMUST00000104353 107 ntBASIC0.65□□□□□ -2.31
Lire1P11260 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.65□□□□□ -2.31
Lire1P11260 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.65□□□□□ -2.31
Lire1P11260 Gm43976-201ENSMUST00000203637 235 ntBASIC0.65□□□□□ -2.31
Lire1P11260 Gm44687-201ENSMUST00000204975 235 ntBASIC0.65□□□□□ -2.31
Lire1P11260 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.65□□□□□ -2.31
Lire1P11260 Gm44948-201ENSMUST00000209050 149 ntBASIC0.65□□□□□ -2.31
Lire1P11260 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.64□□□□□ -2.31
Lire1P11260 Gm23404-201ENSMUST00000082543 97 ntBASIC0.64□□□□□ -2.31
Lire1P11260 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.64□□□□□ -2.31
Lire1P11260 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Lire1P11260 Gm14301-201ENSMUST00000120181 324 ntBASIC0.63□□□□□ -2.31
Lire1P11260 Gm13577-201ENSMUST00000121365 205 ntBASIC0.63□□□□□ -2.31
Lire1P11260 Gm24000-201ENSMUST00000158063 89 ntBASIC0.63□□□□□ -2.31
Lire1P11260 Gm22114-201ENSMUST00000177756 107 ntBASIC0.63□□□□□ -2.31
Lire1P11260 Gm23242-201ENSMUST00000083055 107 ntBASIC0.63□□□□□ -2.31
Lire1P11260 Gm26111-201ENSMUST00000083969 106 ntBASIC0.63□□□□□ -2.31
Lire1P11260 Gm24375-201ENSMUST00000104397 132 ntBASIC0.62□□□□□ -2.31
Lire1P11260 Gm24555-201ENSMUST00000104548 124 ntBASIC0.62□□□□□ -2.31
Lire1P11260 Gm22709-201ENSMUST00000116893 111 ntBASIC0.62□□□□□ -2.31
Lire1P11260 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Lire1P11260 Gm16265-201ENSMUST00000134558 108 ntBASIC0.62□□□□□ -2.31
Lire1P11260 Gm26484-201ENSMUST00000158018 106 ntBASIC0.62□□□□□ -2.31
Lire1P11260 Gm25643-201ENSMUST00000158874 103 ntBASIC0.62□□□□□ -2.31
Lire1P11260 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.62□□□□□ -2.31
Lire1P11260 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Lire1P11260 Gm7654-201ENSMUST00000186738 683 ntBASIC0.62□□□□□ -2.31
Lire1P11260 Gm23101-201ENSMUST00000157550 137 ntBASIC0.61□□□□□ -2.31
Lire1P11260 Gm24288-201ENSMUST00000157630 144 ntBASIC0.61□□□□□ -2.31
Lire1P11260 Gm22340-201ENSMUST00000157717 114 ntBASIC0.61□□□□□ -2.31
Lire1P11260 Gm23665-201ENSMUST00000158054 62 ntBASIC0.61□□□□□ -2.31
Lire1P11260 Gm28256-201ENSMUST00000188953 139 ntBASIC0.61□□□□□ -2.31
Lire1P11260 Gm28559-201ENSMUST00000190532 139 ntBASIC0.61□□□□□ -2.31
Lire1P11260 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.61□□□□□ -2.31
Lire1P11260 Gm29818-201ENSMUST00000218070 165 ntBASIC0.61□□□□□ -2.31
Lire1P11260 Gm22283-201ENSMUST00000082556 161 ntBASIC0.61□□□□□ -2.31
Lire1P11260 Gm23321-201ENSMUST00000104465 126 ntBASIC0.6□□□□□ -2.31
Lire1P11260 Gm44063-201ENSMUST00000203307 376 ntBASIC0.6□□□□□ -2.31
Lire1P11260 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
Lire1P11260 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.6□□□□□ -2.31
Lire1P11260 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.6□□□□□ -2.31
Lire1P11260 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.6□□□□□ -2.31
Lire1P11260 Gm22421-201ENSMUST00000083058 107 ntBASIC0.6□□□□□ -2.31
Lire1P11260 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.6□□□□□ -2.31
Lire1P11260 Gm24445-201ENSMUST00000083981 107 ntBASIC0.6□□□□□ -2.31
Lire1P11260 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Lire1P11260 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Lire1P11260 Gm15030-201ENSMUST00000119804 484 ntBASIC0.59□□□□□ -2.31
Lire1P11260 Gm26274-201ENSMUST00000157103 321 ntBASIC0.59□□□□□ -2.31
Lire1P11260 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.59□□□□□ -2.31
Lire1P11260 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.59□□□□□ -2.31
Lire1P11260 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.59□□□□□ -2.31
Lire1P11260 Gm25855-201ENSMUST00000082787 72 ntBASIC0.59□□□□□ -2.31
Lire1P11260 Gm24629-201ENSMUST00000122762 89 ntBASIC0.58□□□□□ -2.32
Lire1P11260 Gm22814-201ENSMUST00000157452 104 ntBASIC0.58□□□□□ -2.32
Lire1P11260 Gm24880-201ENSMUST00000158776 85 ntBASIC0.58□□□□□ -2.32
Lire1P11260 Mir6389-201ENSMUST00000183661 102 ntBASIC0.58□□□□□ -2.32
Lire1P11260 Gm44419-201ENSMUST00000203338 229 ntBASIC0.58□□□□□ -2.32
Lire1P11260 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.58□□□□□ -2.32
Lire1P11260 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.58□□□□□ -2.32
Lire1P11260 Gm25968-201ENSMUST00000157167 100 ntBASIC0.57□□□□□ -2.32
Lire1P11260 Gm26194-201ENSMUST00000175036 71 ntBASIC0.57□□□□□ -2.32
Lire1P11260 Gm44057-201ENSMUST00000204547 96 ntBASIC0.57□□□□□ -2.32
Lire1P11260 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.57□□□□□ -2.32
Lire1P11260 Gm26495-201ENSMUST00000083152 137 ntBASIC0.57□□□□□ -2.32
Lire1P11260 Gm15002-201ENSMUST00000118406 452 ntBASIC0.56□□□□□ -2.32
Lire1P11260 Gm26255-201ENSMUST00000122492 103 ntBASIC0.56□□□□□ -2.32
Lire1P11260 Gm25558-201ENSMUST00000158083 106 ntBASIC0.56□□□□□ -2.32
Lire1P11260 Gm26285-201ENSMUST00000177923 107 ntBASIC0.56□□□□□ -2.32
Lire1P11260 Gm38060-201ENSMUST00000194822 464 ntBASIC0.56□□□□□ -2.32
Lire1P11260 Gm23622-201ENSMUST00000082460 107 ntBASIC0.56□□□□□ -2.32
Lire1P11260 Gm22364-201ENSMUST00000083097 98 ntBASIC0.56□□□□□ -2.32
Lire1P11260 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Gm23536-201ENSMUST00000157541 134 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Gm23571-201ENSMUST00000180073 127 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Mir6350-201ENSMUST00000183639 105 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Gm37313-201ENSMUST00000191673 290 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Gm34015-201ENSMUST00000194908 451 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Gm42988-201ENSMUST00000198116 225 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Mir219b-201ENSMUST00000198317 65 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Gm25793-201ENSMUST00000083287 107 ntBASIC0.55□□□□□ -2.32
Lire1P11260 Gm22482-201ENSMUST00000122563 359 ntBASIC0.54□□□□□ -2.32
Lire1P11260 Gm25375-201ENSMUST00000158157 135 ntBASIC0.54□□□□□ -2.32
Lire1P11260 Gm22431-201ENSMUST00000158545 107 ntBASIC0.54□□□□□ -2.32
Lire1P11260 Gm27997-201ENSMUST00000184942 69 ntBASIC0.54□□□□□ -2.32
Lire1P11260 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.54□□□□□ -2.32
Lire1P11260 Gm23845-201ENSMUST00000083834 152 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms