Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.53□□□□□ -2.32
Chmp6P0C0A3 Gm43976-201ENSMUST00000203637 235 ntBASIC0.53□□□□□ -2.32
Chmp6P0C0A3 Gm44687-201ENSMUST00000204975 235 ntBASIC0.53□□□□□ -2.32
Chmp6P0C0A3 Gm45508-201ENSMUST00000209298 299 ntBASIC0.53□□□□□ -2.32
Chmp6P0C0A3 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.53□□□□□ -2.32
Chmp6P0C0A3 Mir101a-201ENSMUST00000083517 83 ntBASIC0.53□□□□□ -2.32
Chmp6P0C0A3 Rny1-201ENSMUST00000083767 112 ntBASIC0.53□□□□□ -2.32
Chmp6P0C0A3 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.53□□□□□ -2.32
Chmp6P0C0A3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.33
Chmp6P0C0A3 Gm23321-201ENSMUST00000104465 126 ntBASIC0.52□□□□□ -2.33
Chmp6P0C0A3 Gm24629-201ENSMUST00000122762 89 ntBASIC0.52□□□□□ -2.33
Chmp6P0C0A3 Gm23536-201ENSMUST00000157541 134 ntBASIC0.52□□□□□ -2.33
Chmp6P0C0A3 Gm23584-201ENSMUST00000157655 129 ntBASIC0.52□□□□□ -2.33
Chmp6P0C0A3 Gm22085-201ENSMUST00000158344 110 ntBASIC0.52□□□□□ -2.33
Chmp6P0C0A3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.52□□□□□ -2.33
Chmp6P0C0A3 Gm23412-201ENSMUST00000083017 107 ntBASIC0.52□□□□□ -2.33
Chmp6P0C0A3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.52□□□□□ -2.33
Chmp6P0C0A3 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.51□□□□□ -2.33
Chmp6P0C0A3 Gm24385-201ENSMUST00000122694 350 ntBASIC0.51□□□□□ -2.33
Chmp6P0C0A3 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.51□□□□□ -2.33
Chmp6P0C0A3 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.51□□□□□ -2.33
Chmp6P0C0A3 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.51□□□□□ -2.33
Chmp6P0C0A3 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.51□□□□□ -2.33
Chmp6P0C0A3 Snord42a-201ENSMUST00000082606 65 ntBASIC0.51□□□□□ -2.33
Chmp6P0C0A3 Gm26484-201ENSMUST00000158018 106 ntBASIC0.5□□□□□ -2.33
Chmp6P0C0A3 Gm24000-201ENSMUST00000158063 89 ntBASIC0.5□□□□□ -2.33
Chmp6P0C0A3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.5□□□□□ -2.33
Chmp6P0C0A3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.5□□□□□ -2.33
Chmp6P0C0A3 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Chmp6P0C0A3 Gm23404-201ENSMUST00000082543 97 ntBASIC0.5□□□□□ -2.33
Chmp6P0C0A3 Gm22283-201ENSMUST00000082556 161 ntBASIC0.5□□□□□ -2.33
Chmp6P0C0A3 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.5□□□□□ -2.33
Chmp6P0C0A3 Gm24880-201ENSMUST00000158776 85 ntBASIC0.49□□□□□ -2.33
Chmp6P0C0A3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.49□□□□□ -2.33
Chmp6P0C0A3 Gm27289-201ENSMUST00000183341 82 ntBASIC0.49□□□□□ -2.33
Chmp6P0C0A3 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.49□□□□□ -2.33
Chmp6P0C0A3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.49□□□□□ -2.33
Chmp6P0C0A3 Gm26495-201ENSMUST00000083152 137 ntBASIC0.49□□□□□ -2.33
Chmp6P0C0A3 Gm25558-201ENSMUST00000158083 106 ntBASIC0.48□□□□□ -2.33
Chmp6P0C0A3 Gm24345-201ENSMUST00000158706 124 ntBASIC0.48□□□□□ -2.33
Chmp6P0C0A3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.48□□□□□ -2.33
Chmp6P0C0A3 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.47□□□□□ -2.33
Chmp6P0C0A3 Gm22814-201ENSMUST00000157452 104 ntBASIC0.47□□□□□ -2.33
Chmp6P0C0A3 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.47□□□□□ -2.33
Chmp6P0C0A3 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.47□□□□□ -2.33
Chmp6P0C0A3 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.47□□□□□ -2.33
Chmp6P0C0A3 Gm24342-201ENSMUST00000103907 104 ntBASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Gm22021-201ENSMUST00000104353 107 ntBASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Snord89-201ENSMUST00000104516 110 ntBASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Gm16539-201ENSMUST00000160086 327 ntBASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Gm26073-201ENSMUST00000179906 127 ntBASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Gm28849-201ENSMUST00000188127 174 ntBASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Gm28669-201ENSMUST00000188400 100 ntBASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Gm44488-201ENSMUST00000199467 119 ntBASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Gm44419-201ENSMUST00000203338 229 ntBASIC0.46□□□□□ -2.34
Chmp6P0C0A3 Gm22421-201ENSMUST00000083058 107 ntBASIC0.45□□□□□ -2.34
Chmp6P0C0A3 Gm24616-201ENSMUST00000083274 139 ntBASIC0.45□□□□□ -2.34
Chmp6P0C0A3 Mir500-201ENSMUST00000093600 92 ntBASIC0.45□□□□□ -2.34
Chmp6P0C0A3 Mir709-201ENSMUST00000102190 88 ntBASIC0.44□□□□□ -2.34
Chmp6P0C0A3 Gm22786-201ENSMUST00000104086 122 ntBASIC0.44□□□□□ -2.34
Chmp6P0C0A3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.44□□□□□ -2.34
Chmp6P0C0A3 Gm23024-201ENSMUST00000158770 292 ntBASIC0.44□□□□□ -2.34
Chmp6P0C0A3 Gm44052-201ENSMUST00000203382 396 ntBASIC0.44□□□□□ -2.34
Chmp6P0C0A3 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.44□□□□□ -2.34
Chmp6P0C0A3 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Chmp6P0C0A3 Gm14946-201ENSMUST00000119859 296 ntBASIC0.43□□□□□ -2.34
Chmp6P0C0A3 Gm23982-201ENSMUST00000157141 106 ntBASIC0.43□□□□□ -2.34
Chmp6P0C0A3 Gm24211-201ENSMUST00000158264 107 ntBASIC0.43□□□□□ -2.34
Chmp6P0C0A3 Mir7039-201ENSMUST00000183852 85 ntBASIC0.43□□□□□ -2.34
Chmp6P0C0A3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.43□□□□□ -2.34
Chmp6P0C0A3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.43□□□□□ -2.34
Chmp6P0C0A3 Mir451a-201ENSMUST00000093557 72 ntBASIC0.43□□□□□ -2.34
Chmp6P0C0A3 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.42□□□□□ -2.34
Chmp6P0C0A3 Gm26274-201ENSMUST00000157103 321 ntBASIC0.42□□□□□ -2.34
Chmp6P0C0A3 Gm37997-201ENSMUST00000193515 267 ntBASIC0.42□□□□□ -2.34
Chmp6P0C0A3 Gm44057-201ENSMUST00000204547 96 ntBASIC0.42□□□□□ -2.34
Chmp6P0C0A3 Gm23640-201ENSMUST00000157860 104 ntBASIC0.41□□□□□ -2.34
Chmp6P0C0A3 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.41□□□□□ -2.34
Chmp6P0C0A3 Mir6389-201ENSMUST00000183661 102 ntBASIC0.41□□□□□ -2.34
Chmp6P0C0A3 Gm45544-201ENSMUST00000211130 88 ntBASIC0.41□□□□□ -2.34
Chmp6P0C0A3 Gm45471-201ENSMUST00000211270 281 ntBASIC0.41□□□□□ -2.34
Chmp6P0C0A3 Gm25138-201ENSMUST00000083248 136 ntBASIC0.41□□□□□ -2.34
Chmp6P0C0A3 Gm16546-201ENSMUST00000159442 355 ntBASIC0.4□□□□□ -2.35
Chmp6P0C0A3 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.4□□□□□ -2.35
Chmp6P0C0A3 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.4□□□□□ -2.35
Chmp6P0C0A3 Gm30155-201ENSMUST00000223458 339 ntBASIC0.4□□□□□ -2.35
Chmp6P0C0A3 Gm23969-201ENSMUST00000083324 74 ntBASIC0.4□□□□□ -2.35
Chmp6P0C0A3 Gm26303-201ENSMUST00000116845 119 ntBASIC0.39□□□□□ -2.35
Chmp6P0C0A3 Gm27997-201ENSMUST00000184942 69 ntBASIC0.39□□□□□ -2.35
Chmp6P0C0A3 Gm43563-201ENSMUST00000196761 198 ntBASIC0.39□□□□□ -2.35
Chmp6P0C0A3 Mir219b-201ENSMUST00000198317 65 ntBASIC0.39□□□□□ -2.35
Chmp6P0C0A3 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.39□□□□□ -2.35
Chmp6P0C0A3 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.39□□□□□ -2.35
Chmp6P0C0A3 Gm23845-201ENSMUST00000083834 152 ntBASIC0.39□□□□□ -2.35
Chmp6P0C0A3 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.38□□□□□ -2.35
Chmp6P0C0A3 Gm25878-201ENSMUST00000104327 93 ntBASIC0.38□□□□□ -2.35
Chmp6P0C0A3 Gm22321-201ENSMUST00000157152 104 ntBASIC0.38□□□□□ -2.35
Chmp6P0C0A3 Gm26415-201ENSMUST00000157673 292 ntBASIC0.38□□□□□ -2.35
Chmp6P0C0A3 Gm23853-201ENSMUST00000158375 104 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms