Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.56□□□□□ -2.32
TnfP06804 Gm23412-201ENSMUST00000083017 107 ntBASIC0.56□□□□□ -2.32
TnfP06804 Gm23039-201ENSMUST00000083870 161 ntBASIC0.56□□□□□ -2.32
TnfP06804 Gm24629-201ENSMUST00000122762 89 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm24909-201ENSMUST00000157290 280 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm23536-201ENSMUST00000157541 134 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm24678-201ENSMUST00000158756 104 ntBASIC0.55□□□□□ -2.32
TnfP06804 Mir3079-201ENSMUST00000175428 90 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm26285-201ENSMUST00000177923 107 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm28435-201ENSMUST00000185496 108 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm28256-201ENSMUST00000188953 139 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm28559-201ENSMUST00000190532 139 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm36956-201ENSMUST00000193830 214 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm42988-201ENSMUST00000198116 225 ntBASIC0.55□□□□□ -2.32
TnfP06804 Mir219b-201ENSMUST00000198317 65 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm29818-201ENSMUST00000218070 165 ntBASIC0.55□□□□□ -2.32
TnfP06804 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm23622-201ENSMUST00000082460 107 ntBASIC0.55□□□□□ -2.32
TnfP06804 Gm22814-201ENSMUST00000157452 104 ntBASIC0.54□□□□□ -2.32
TnfP06804 Gm24211-201ENSMUST00000158264 107 ntBASIC0.54□□□□□ -2.32
TnfP06804 Gm16404-201ENSMUST00000177739 468 ntBASIC0.54□□□□□ -2.32
TnfP06804 Gm14598-201ENSMUST00000180109 468 ntBASIC0.54□□□□□ -2.32
TnfP06804 Gm14625-201ENSMUST00000180231 468 ntBASIC0.54□□□□□ -2.32
TnfP06804 Gm44419-201ENSMUST00000203338 229 ntBASIC0.54□□□□□ -2.32
TnfP06804 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.54□□□□□ -2.32
TnfP06804 Gm44948-201ENSMUST00000209050 149 ntBASIC0.54□□□□□ -2.32
TnfP06804 Gm45508-201ENSMUST00000209298 299 ntBASIC0.54□□□□□ -2.32
TnfP06804 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.54□□□□□ -2.32
TnfP06804 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.54□□□□□ -2.32
TnfP06804 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.54□□□□□ -2.32
TnfP06804 Gm22796-201ENSMUST00000157234 106 ntBASIC0.53□□□□□ -2.32
TnfP06804 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.52□□□□□ -2.33
TnfP06804 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.52□□□□□ -2.33
TnfP06804 Gm25968-201ENSMUST00000157167 100 ntBASIC0.52□□□□□ -2.33
TnfP06804 Gm25378-201ENSMUST00000104333 129 ntBASIC0.51□□□□□ -2.33
TnfP06804 Gm24000-201ENSMUST00000158063 89 ntBASIC0.51□□□□□ -2.33
TnfP06804 Gm28849-201ENSMUST00000188127 174 ntBASIC0.51□□□□□ -2.33
TnfP06804 Gm37997-201ENSMUST00000193515 267 ntBASIC0.51□□□□□ -2.33
TnfP06804 Gm22302-201ENSMUST00000082657 106 ntBASIC0.51□□□□□ -2.33
TnfP06804 Gm26495-201ENSMUST00000083152 137 ntBASIC0.51□□□□□ -2.33
TnfP06804 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.51□□□□□ -2.33
TnfP06804 Gm22021-201ENSMUST00000104353 107 ntBASIC0.5□□□□□ -2.33
TnfP06804 Gm23672-201ENSMUST00000157471 107 ntBASIC0.5□□□□□ -2.33
TnfP06804 Gm23584-201ENSMUST00000157655 129 ntBASIC0.5□□□□□ -2.33
TnfP06804 Gm25558-201ENSMUST00000158083 106 ntBASIC0.5□□□□□ -2.33
TnfP06804 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.5□□□□□ -2.33
TnfP06804 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.5□□□□□ -2.33
TnfP06804 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.5□□□□□ -2.33
TnfP06804 Gm22421-201ENSMUST00000083058 107 ntBASIC0.5□□□□□ -2.33
TnfP06804 Mir101a-201ENSMUST00000083517 83 ntBASIC0.5□□□□□ -2.33
TnfP06804 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.5□□□□□ -2.33
TnfP06804 Gm25044-201ENSMUST00000158603 104 ntBASIC0.49□□□□□ -2.33
TnfP06804 Gm24880-201ENSMUST00000158776 85 ntBASIC0.49□□□□□ -2.33
TnfP06804 Gm16546-201ENSMUST00000159442 355 ntBASIC0.49□□□□□ -2.33
TnfP06804 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
TnfP06804 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.49□□□□□ -2.33
TnfP06804 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.49□□□□□ -2.33
TnfP06804 Gm22283-201ENSMUST00000082556 161 ntBASIC0.49□□□□□ -2.33
TnfP06804 Gm23126-201ENSMUST00000104260 134 ntBASIC0.48□□□□□ -2.33
TnfP06804 Gm24385-201ENSMUST00000122694 350 ntBASIC0.48□□□□□ -2.33
TnfP06804 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.48□□□□□ -2.33
TnfP06804 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TnfP06804 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.48□□□□□ -2.33
TnfP06804 Gm22364-201ENSMUST00000083097 98 ntBASIC0.48□□□□□ -2.33
TnfP06804 Gm23982-201ENSMUST00000157141 106 ntBASIC0.47□□□□□ -2.33
TnfP06804 Gm22522-201ENSMUST00000158271 151 ntBASIC0.47□□□□□ -2.33
TnfP06804 Gm22431-201ENSMUST00000158545 107 ntBASIC0.47□□□□□ -2.33
TnfP06804 Gm44052-201ENSMUST00000203382 396 ntBASIC0.47□□□□□ -2.33
TnfP06804 Gm23640-201ENSMUST00000157860 104 ntBASIC0.46□□□□□ -2.34
TnfP06804 Gm26484-201ENSMUST00000158018 106 ntBASIC0.46□□□□□ -2.34
TnfP06804 Gm24345-201ENSMUST00000158706 124 ntBASIC0.46□□□□□ -2.34
TnfP06804 Gm28669-201ENSMUST00000188400 100 ntBASIC0.46□□□□□ -2.34
TnfP06804 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.46□□□□□ -2.34
TnfP06804 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.46□□□□□ -2.34
TnfP06804 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.46□□□□□ -2.34
TnfP06804 Gm23242-201ENSMUST00000083055 107 ntBASIC0.46□□□□□ -2.34
TnfP06804 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.45□□□□□ -2.34
TnfP06804 Mir709-201ENSMUST00000102190 88 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm22469-201ENSMUST00000104118 133 ntBASIC0.45□□□□□ -2.34
TnfP06804 Snord89-201ENSMUST00000104516 110 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm22321-201ENSMUST00000157152 104 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm16539-201ENSMUST00000160086 327 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm26194-201ENSMUST00000175036 71 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm27289-201ENSMUST00000183341 82 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm27997-201ENSMUST00000184942 69 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm43432-201ENSMUST00000196352 121 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm44490-201ENSMUST00000198566 127 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm44057-201ENSMUST00000204547 96 ntBASIC0.45□□□□□ -2.34
TnfP06804 Gm45471-201ENSMUST00000211270 281 ntBASIC0.45□□□□□ -2.34
TnfP06804 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
TnfP06804 Gm26255-201ENSMUST00000122492 103 ntBASIC0.44□□□□□ -2.34
TnfP06804 Gm24501-201ENSMUST00000158452 62 ntBASIC0.44□□□□□ -2.34
TnfP06804 Gm26073-201ENSMUST00000179906 127 ntBASIC0.44□□□□□ -2.34
TnfP06804 Gm23571-201ENSMUST00000180073 127 ntBASIC0.44□□□□□ -2.34
TnfP06804 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.44□□□□□ -2.34
TnfP06804 Gm44828-201ENSMUST00000203745 106 ntBASIC0.44□□□□□ -2.34
TnfP06804 Gm23845-201ENSMUST00000083834 152 ntBASIC0.44□□□□□ -2.34
TnfP06804 Gm14884-201ENSMUST00000120456 196 ntBASIC0.43□□□□□ -2.34
TnfP06804 Gm6272-201ENSMUST00000121256 171 ntBASIC0.43□□□□□ -2.34
TnfP06804 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms