Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC-0.02□□□□□ -2.41
CopeO89079 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
CopeO89079 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.02□□□□□ -2.41
CopeO89079 Rny1-201ENSMUST00000083767 112 ntBASIC-0.02□□□□□ -2.41
CopeO89079 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
CopeO89079 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.03□□□□□ -2.41
CopeO89079 AC136457.1-201ENSMUST00000224195 156 ntBASIC-0.03□□□□□ -2.41
CopeO89079 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.03□□□□□ -2.41
CopeO89079 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.03□□□□□ -2.41
CopeO89079 Gm24208-201ENSMUST00000082783 135 ntBASIC-0.03□□□□□ -2.41
CopeO89079 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.03□□□□□ -2.41
CopeO89079 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.04□□□□□ -2.42
CopeO89079 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.04□□□□□ -2.42
CopeO89079 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC-0.04□□□□□ -2.42
CopeO89079 AC116589.1-201ENSMUST00000220634 327 ntBASIC-0.04□□□□□ -2.42
CopeO89079 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.04□□□□□ -2.42
CopeO89079 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.04□□□□□ -2.42
CopeO89079 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.05□□□□□ -2.42
CopeO89079 Gm25044-201ENSMUST00000158603 104 ntBASIC-0.05□□□□□ -2.42
CopeO89079 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.05□□□□□ -2.42
CopeO89079 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.05□□□□□ -2.42
CopeO89079 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.05□□□□□ -2.42
CopeO89079 Gm28669-201ENSMUST00000188400 100 ntBASIC-0.05□□□□□ -2.42
CopeO89079 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.05□□□□□ -2.42
CopeO89079 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.05□□□□□ -2.42
CopeO89079 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.05□□□□□ -2.42
CopeO89079 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.05□□□□□ -2.42
CopeO89079 AC166358.7-201ENSMUST00000221132 108 ntBASIC-0.05□□□□□ -2.42
CopeO89079 AC125543.5-201ENSMUST00000222799 108 ntBASIC-0.05□□□□□ -2.42
CopeO89079 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.06□□□□□ -2.42
CopeO89079 Mir1197-201ENSMUST00000117037 120 ntBASIC-0.06□□□□□ -2.42
CopeO89079 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.06□□□□□ -2.42
CopeO89079 Snora20-201ENSMUST00000082703 128 ntBASIC-0.06□□□□□ -2.42
CopeO89079 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.06□□□□□ -2.42
CopeO89079 Gm3867-201ENSMUST00000086108 279 ntBASIC-0.06□□□□□ -2.42
CopeO89079 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.07□□□□□ -2.42
CopeO89079 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.07□□□□□ -2.42
CopeO89079 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.07□□□□□ -2.42
CopeO89079 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.07□□□□□ -2.42
CopeO89079 Gm24847-201ENSMUST00000158032 108 ntBASIC-0.07□□□□□ -2.42
CopeO89079 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.07□□□□□ -2.42
CopeO89079 Cfap61-214ENSMUST00000167179 183 ntBASIC-0.07□□□□□ -2.42
CopeO89079 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.07□□□□□ -2.42
CopeO89079 Mir411-201ENSMUST00000083543 82 ntBASIC-0.07□□□□□ -2.42
CopeO89079 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.08□□□□□ -2.42
CopeO89079 Gm13720-201ENSMUST00000120741 196 ntBASIC-0.08□□□□□ -2.42
CopeO89079 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-0.08□□□□□ -2.42
CopeO89079 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.08□□□□□ -2.42
CopeO89079 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.08□□□□□ -2.42
CopeO89079 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.08□□□□□ -2.42
CopeO89079 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.08□□□□□ -2.42
CopeO89079 Snord82-201ENSMUST00000082889 70 ntBASIC-0.08□□□□□ -2.42
CopeO89079 Mir547-201ENSMUST00000102051 78 ntBASIC-0.09□□□□□ -2.42
CopeO89079 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
CopeO89079 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.09□□□□□ -2.42
CopeO89079 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.09□□□□□ -2.42
CopeO89079 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.09□□□□□ -2.42
CopeO89079 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.09□□□□□ -2.42
CopeO89079 Gm45616-201ENSMUST00000211711 319 ntBASIC-0.09□□□□□ -2.42
CopeO89079 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.09□□□□□ -2.42
CopeO89079 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.1□□□□□ -2.43
CopeO89079 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.1□□□□□ -2.43
CopeO89079 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
CopeO89079 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.1□□□□□ -2.43
CopeO89079 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.1□□□□□ -2.43
CopeO89079 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.1□□□□□ -2.43
CopeO89079 Gm43944-201ENSMUST00000205220 120 ntBASIC-0.11□□□□□ -2.43
CopeO89079 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.11□□□□□ -2.43
CopeO89079 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.11□□□□□ -2.43
CopeO89079 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Gm44308-201ENSMUST00000197080 99 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.12□□□□□ -2.43
CopeO89079 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.12□□□□□ -2.43
CopeO89079 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Mir382-201ENSMUST00000083494 76 ntBASIC-0.12□□□□□ -2.43
CopeO89079 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.13□□□□□ -2.43
CopeO89079 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
CopeO89079 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.13□□□□□ -2.43
CopeO89079 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.13□□□□□ -2.43
CopeO89079 Gm27755-201ENSMUST00000184623 132 ntBASIC-0.13□□□□□ -2.43
CopeO89079 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC-0.13□□□□□ -2.43
CopeO89079 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.13□□□□□ -2.43
CopeO89079 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Gm14574-201ENSMUST00000120644 279 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Gm24499-201ENSMUST00000158446 104 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Gm23474-201ENSMUST00000158884 75 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.14□□□□□ -2.43
CopeO89079 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.14□□□□□ -2.43
CopeO89079 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms