Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ClppO88696 Gm38274-201ENSMUST00000195689 148 ntBASIC1.07□□□□□ -2.24
ClppO88696 Gm44055-201ENSMUST00000204376 247 ntBASIC1.07□□□□□ -2.24
ClppO88696 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.07□□□□□ -2.24
ClppO88696 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.07□□□□□ -2.24
ClppO88696 Gm26074-201ENSMUST00000104063 129 ntBASIC1.06□□□□□ -2.24
ClppO88696 Gm13711-201ENSMUST00000119708 453 ntBASIC1.06□□□□□ -2.24
ClppO88696 Gm11792-201ENSMUST00000120640 168 ntBASIC1.06□□□□□ -2.24
ClppO88696 Gm23106-201ENSMUST00000157554 101 ntBASIC1.06□□□□□ -2.24
ClppO88696 Gm23996-201ENSMUST00000158062 131 ntBASIC1.06□□□□□ -2.24
ClppO88696 Gm23113-201ENSMUST00000158477 99 ntBASIC1.06□□□□□ -2.24
ClppO88696 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.06□□□□□ -2.24
ClppO88696 Gm44977-201ENSMUST00000205283 420 ntBASIC1.06□□□□□ -2.24
ClppO88696 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
ClppO88696 Gm24523-201ENSMUST00000083965 132 ntBASIC1.06□□□□□ -2.24
ClppO88696 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
ClppO88696 Gm24375-201ENSMUST00000104397 132 ntBASIC1.05□□□□□ -2.24
ClppO88696 Gm13801-201ENSMUST00000120750 160 ntBASIC1.05□□□□□ -2.24
ClppO88696 Gm25024-201ENSMUST00000179667 104 ntBASIC1.05□□□□□ -2.24
ClppO88696 Gm27747-201ENSMUST00000184707 85 ntBASIC1.05□□□□□ -2.24
ClppO88696 Gm27656-201ENSMUST00000185055 80 ntBASIC1.05□□□□□ -2.24
ClppO88696 Gm29022-201ENSMUST00000190702 225 ntBASIC1.05□□□□□ -2.24
ClppO88696 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
ClppO88696 Gm18188-201ENSMUST00000219386 478 ntBASIC1.05□□□□□ -2.24
ClppO88696 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.05□□□□□ -2.24
ClppO88696 Gm25128-201ENSMUST00000083339 76 ntBASIC1.05□□□□□ -2.24
ClppO88696 Gm24453-201ENSMUST00000083346 76 ntBASIC1.05□□□□□ -2.24
ClppO88696 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
ClppO88696 Gm22003-201ENSMUST00000101885 107 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm24423-201ENSMUST00000101982 106 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm11856-201ENSMUST00000118712 276 ntBASIC1.04□□□□□ -2.24
ClppO88696 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ClppO88696 Gm25664-201ENSMUST00000157697 107 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm24808-201ENSMUST00000157993 118 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm24392-201ENSMUST00000158136 103 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm22888-201ENSMUST00000158640 77 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm24667-201ENSMUST00000158938 103 ntBASIC1.04□□□□□ -2.24
ClppO88696 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm23410-201ENSMUST00000179967 107 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm22756-201ENSMUST00000180118 107 ntBASIC1.04□□□□□ -2.24
ClppO88696 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ClppO88696 Gm23299-201ENSMUST00000082708 79 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm22505-201ENSMUST00000082956 108 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm22363-201ENSMUST00000083100 108 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm23814-201ENSMUST00000083230 102 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm23095-201ENSMUST00000083446 107 ntBASIC1.04□□□□□ -2.24
ClppO88696 Gm22784-201ENSMUST00000104088 132 ntBASIC1.03□□□□□ -2.24
ClppO88696 Gm24909-201ENSMUST00000157290 280 ntBASIC1.03□□□□□ -2.24
ClppO88696 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.03□□□□□ -2.24
ClppO88696 Gm27668-201ENSMUST00000184188 120 ntBASIC1.03□□□□□ -2.24
ClppO88696 Gm26224-201ENSMUST00000082506 80 ntBASIC1.03□□□□□ -2.24
ClppO88696 Gm24624-201ENSMUST00000082617 164 ntBASIC1.03□□□□□ -2.24
ClppO88696 Mir875-201ENSMUST00000104698 78 ntBASIC1.02□□□□□ -2.25
ClppO88696 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.02□□□□□ -2.25
ClppO88696 Gm22553-201ENSMUST00000157797 295 ntBASIC1.02□□□□□ -2.25
ClppO88696 Gm25715-201ENSMUST00000158627 125 ntBASIC1.02□□□□□ -2.25
ClppO88696 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.02□□□□□ -2.25
ClppO88696 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.02□□□□□ -2.25
ClppO88696 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.02□□□□□ -2.25
ClppO88696 Gm22704-201ENSMUST00000083027 137 ntBASIC1.02□□□□□ -2.25
ClppO88696 Gm23679-201ENSMUST00000083161 119 ntBASIC1.02□□□□□ -2.25
ClppO88696 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.02□□□□□ -2.25
ClppO88696 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.02□□□□□ -2.25
ClppO88696 Gm24431-201ENSMUST00000104073 66 ntBASIC1.01□□□□□ -2.25
ClppO88696 Gm14792-201ENSMUST00000119725 258 ntBASIC1.01□□□□□ -2.25
ClppO88696 Gm23340-201ENSMUST00000158955 123 ntBASIC1.01□□□□□ -2.25
ClppO88696 Gm24460-201ENSMUST00000082731 106 ntBASIC1.01□□□□□ -2.25
ClppO88696 Gm25650-201ENSMUST00000083784 162 ntBASIC1.01□□□□□ -2.25
ClppO88696 Gm12797-201ENSMUST00000118645 273 ntBASIC1□□□□□ -2.25
ClppO88696 Gm26402-201ENSMUST00000158499 113 ntBASIC1□□□□□ -2.25
ClppO88696 Gm22802-201ENSMUST00000175621 89 ntBASIC1□□□□□ -2.25
ClppO88696 Mir6381-201ENSMUST00000183426 87 ntBASIC1□□□□□ -2.25
ClppO88696 Gm27420-201ENSMUST00000183823 79 ntBASIC1□□□□□ -2.25
ClppO88696 Gm27905-201ENSMUST00000184005 207 ntBASIC1□□□□□ -2.25
ClppO88696 Gm44563-201ENSMUST00000207958 178 ntBASIC1□□□□□ -2.25
ClppO88696 Gm25538-201ENSMUST00000101943 107 ntBASIC0.99□□□□□ -2.25
ClppO88696 Mir880-201ENSMUST00000104809 78 ntBASIC0.99□□□□□ -2.25
ClppO88696 Gm11322-201ENSMUST00000118095 435 ntBASIC0.99□□□□□ -2.25
ClppO88696 Gm23219-201ENSMUST00000158123 87 ntBASIC0.99□□□□□ -2.25
ClppO88696 Gm25235-201ENSMUST00000179933 107 ntBASIC0.99□□□□□ -2.25
ClppO88696 Gm27545-201ENSMUST00000184755 202 ntBASIC0.99□□□□□ -2.25
ClppO88696 Gm44358-201ENSMUST00000196301 98 ntBASIC0.99□□□□□ -2.25
ClppO88696 Gm44301-201ENSMUST00000200362 143 ntBASIC0.99□□□□□ -2.25
ClppO88696 Snora41-201ENSMUST00000082668 132 ntBASIC0.99□□□□□ -2.25
ClppO88696 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.99□□□□□ -2.25
ClppO88696 Snord71-201ENSMUST00000104361 85 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm12837-201ENSMUST00000120131 373 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm11388-201ENSMUST00000120908 159 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.98□□□□□ -2.25
ClppO88696 Gm22233-201ENSMUST00000157464 114 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm25868-201ENSMUST00000158253 114 ntBASIC0.98□□□□□ -2.25
ClppO88696 Mir7039-201ENSMUST00000183852 85 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm27419-201ENSMUST00000184576 109 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm28862-201ENSMUST00000188246 163 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm38183-201ENSMUST00000193189 205 ntBASIC0.98□□□□□ -2.25
ClppO88696 Mir3970-201ENSMUST00000199287 90 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm44057-201ENSMUST00000204547 96 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm45508-201ENSMUST00000209298 299 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm23451-201ENSMUST00000083328 122 ntBASIC0.98□□□□□ -2.25
ClppO88696 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms