Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm10730-201ENSMUST00000194097 2723 ntBASIC-0.36□□□□□ -2.47
Hmgb3O54879 Mir547-201ENSMUST00000102051 78 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm24962-201ENSMUST00000157917 109 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm23759-201ENSMUST00000158351 268 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm23016-201ENSMUST00000158431 62 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm27957-201ENSMUST00000184054 127 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm44726-201ENSMUST00000203427 217 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.37□□□□□ -2.47
Hmgb3O54879 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.38□□□□□ -2.47
Hmgb3O54879 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-0.38□□□□□ -2.47
Hmgb3O54879 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.38□□□□□ -2.47
Hmgb3O54879 Mir7014-201ENSMUST00000183853 63 ntBASIC-0.38□□□□□ -2.47
Hmgb3O54879 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.38□□□□□ -2.47
Hmgb3O54879 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.38□□□□□ -2.47
Hmgb3O54879 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.38□□□□□ -2.47
Hmgb3O54879 Gm25820-201ENSMUST00000198589 127 ntBASIC-0.38□□□□□ -2.47
Hmgb3O54879 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.38□□□□□ -2.47
Hmgb3O54879 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-0.38□□□□□ -2.47
Hmgb3O54879 Gm23492-201ENSMUST00000116837 115 ntBASIC-0.39□□□□□ -2.47
Hmgb3O54879 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.39□□□□□ -2.47
Hmgb3O54879 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.39□□□□□ -2.47
Hmgb3O54879 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.39□□□□□ -2.47
Hmgb3O54879 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.39□□□□□ -2.47
Hmgb3O54879 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.39□□□□□ -2.47
Hmgb3O54879 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.39□□□□□ -2.47
Hmgb3O54879 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Gm12584-201ENSMUST00000117109 1105 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Gm25781-201ENSMUST00000122527 84 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Gm23212-201ENSMUST00000122718 60 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.4□□□□□ -2.47
Hmgb3O54879 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 AC167192.2-201ENSMUST00000224794 198 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Gm25930-201ENSMUST00000082785 107 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Mir410-201ENSMUST00000083563 81 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Mir214-201ENSMUST00000083582 110 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.4□□□□□ -2.47
Hmgb3O54879 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Mir100-201ENSMUST00000175270 80 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm25314-201ENSMUST00000178810 79 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.41□□□□□ -2.48
Hmgb3O54879 Gm22883-201ENSMUST00000157376 106 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm25909-201ENSMUST00000157619 121 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.42□□□□□ -2.48
Hmgb3O54879 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm28438-201ENSMUST00000188299 345 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC-0.42□□□□□ -2.48
Hmgb3O54879 Mir191-201ENSMUST00000196210 74 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.42□□□□□ -2.48
Hmgb3O54879 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.43□□□□□ -2.48
Hmgb3O54879 Gm25494-201ENSMUST00000158143 100 ntBASIC-0.43□□□□□ -2.48
Hmgb3O54879 Gm26180-201ENSMUST00000179942 107 ntBASIC-0.43□□□□□ -2.48
Hmgb3O54879 Gm23148-201ENSMUST00000180367 107 ntBASIC-0.43□□□□□ -2.48
Hmgb3O54879 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.43□□□□□ -2.48
Hmgb3O54879 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.43□□□□□ -2.48
Hmgb3O54879 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.43□□□□□ -2.48
Hmgb3O54879 Gm45402-201ENSMUST00000211796 223 ntBASIC-0.43□□□□□ -2.48
Hmgb3O54879 Gm25258-201ENSMUST00000083049 107 ntBASIC-0.43□□□□□ -2.48
Hmgb3O54879 Gm26108-201ENSMUST00000083973 191 ntBASIC-0.43□□□□□ -2.48
Hmgb3O54879 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.44□□□□□ -2.48
Hmgb3O54879 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 Gm23404-201ENSMUST00000082543 97 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 Gm25579-201ENSMUST00000083407 106 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.44□□□□□ -2.48
Hmgb3O54879 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
Hmgb3O54879 Gm22818-201ENSMUST00000157446 104 ntBASIC-0.45□□□□□ -2.48
Hmgb3O54879 Gm24241-201ENSMUST00000157787 145 ntBASIC-0.45□□□□□ -2.48
Hmgb3O54879 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.45□□□□□ -2.48
Hmgb3O54879 Mir532-201ENSMUST00000093630 96 ntBASIC-0.45□□□□□ -2.48
Hmgb3O54879 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.46□□□□□ -2.48
Hmgb3O54879 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.46□□□□□ -2.48
Hmgb3O54879 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.46□□□□□ -2.48
Hmgb3O54879 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms