Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
DffbO54788 Gm12941-201ENSMUST00000117934 220 ntBASIC1.64□□□□□ -2.15
DffbO54788 Gm24478-201ENSMUST00000157439 158 ntBASIC1.64□□□□□ -2.15
DffbO54788 Gm26345-201ENSMUST00000157534 120 ntBASIC1.64□□□□□ -2.15
DffbO54788 Gm22336-201ENSMUST00000157719 107 ntBASIC1.64□□□□□ -2.15
DffbO54788 Gm26403-201ENSMUST00000158500 105 ntBASIC1.64□□□□□ -2.15
DffbO54788 Gm26004-201ENSMUST00000158804 116 ntBASIC1.64□□□□□ -2.15
DffbO54788 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.64□□□□□ -2.15
DffbO54788 Gm26097-201ENSMUST00000179642 93 ntBASIC1.64□□□□□ -2.15
DffbO54788 Gm27443-201ENSMUST00000184660 98 ntBASIC1.64□□□□□ -2.15
DffbO54788 Gm20734-201ENSMUST00000216939 193 ntBASIC1.64□□□□□ -2.15
DffbO54788 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
DffbO54788 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
DffbO54788 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.63□□□□□ -2.15
DffbO54788 Gm22545-201ENSMUST00000104350 132 ntBASIC1.63□□□□□ -2.15
DffbO54788 Gm15069-201ENSMUST00000117792 192 ntBASIC1.63□□□□□ -2.15
DffbO54788 Gm15068-201ENSMUST00000119796 192 ntBASIC1.63□□□□□ -2.15
DffbO54788 Gm14709-201ENSMUST00000121225 304 ntBASIC1.63□□□□□ -2.15
DffbO54788 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
DffbO54788 Gm16546-201ENSMUST00000159442 355 ntBASIC1.63□□□□□ -2.15
DffbO54788 Mir6379-201ENSMUST00000183392 115 ntBASIC1.63□□□□□ -2.15
DffbO54788 Gm29603-201ENSMUST00000186792 334 ntBASIC1.63□□□□□ -2.15
DffbO54788 Gm43602-201ENSMUST00000196772 300 ntBASIC1.63□□□□□ -2.15
DffbO54788 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.63□□□□□ -2.15
DffbO54788 Mir186-201ENSMUST00000083497 71 ntBASIC1.63□□□□□ -2.15
DffbO54788 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.63□□□□□ -2.15
DffbO54788 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.63□□□□□ -2.15
DffbO54788 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
DffbO54788 Gm25094-201ENSMUST00000103992 131 ntBASIC1.62□□□□□ -2.15
DffbO54788 Gm13588-201ENSMUST00000120026 135 ntBASIC1.62□□□□□ -2.15
DffbO54788 Gm13246-201ENSMUST00000120994 315 ntBASIC1.62□□□□□ -2.15
DffbO54788 Gm16328-201ENSMUST00000126985 196 ntBASIC1.62□□□□□ -2.15
DffbO54788 Gm22727-201ENSMUST00000158090 116 ntBASIC1.62□□□□□ -2.15
DffbO54788 Gm21885-201ENSMUST00000178891 327 ntBASIC1.62□□□□□ -2.15
DffbO54788 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.62□□□□□ -2.15
DffbO54788 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.62□□□□□ -2.15
DffbO54788 Mir490-201ENSMUST00000093567 84 ntBASIC1.62□□□□□ -2.15
DffbO54788 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
DffbO54788 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.61□□□□□ -2.15
DffbO54788 Gm24098-201ENSMUST00000102075 109 ntBASIC1.61□□□□□ -2.15
DffbO54788 Gm25381-201ENSMUST00000102078 109 ntBASIC1.61□□□□□ -2.15
DffbO54788 Gm25090-201ENSMUST00000104000 132 ntBASIC1.61□□□□□ -2.15
DffbO54788 Gm22850-201ENSMUST00000157714 82 ntBASIC1.61□□□□□ -2.15
DffbO54788 Gm25730-201ENSMUST00000178753 165 ntBASIC1.61□□□□□ -2.15
DffbO54788 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.61□□□□□ -2.15
DffbO54788 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
DffbO54788 Gm26074-201ENSMUST00000104063 129 ntBASIC1.6□□□□□ -2.15
DffbO54788 Snord100-201ENSMUST00000116836 74 ntBASIC1.6□□□□□ -2.15
DffbO54788 Gm14671-201ENSMUST00000121790 262 ntBASIC1.6□□□□□ -2.15
DffbO54788 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.6□□□□□ -2.15
DffbO54788 Gm22477-201ENSMUST00000122569 316 ntBASIC1.6□□□□□ -2.15
DffbO54788 Mir7226-201ENSMUST00000184953 60 ntBASIC1.6□□□□□ -2.15
DffbO54788 Gm38364-201ENSMUST00000191814 179 ntBASIC1.6□□□□□ -2.15
DffbO54788 Gm42623-201ENSMUST00000197225 379 ntBASIC1.6□□□□□ -2.15
DffbO54788 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.6□□□□□ -2.15
DffbO54788 Gm45754-201ENSMUST00000212380 279 ntBASIC1.6□□□□□ -2.15
DffbO54788 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.6□□□□□ -2.15
DffbO54788 Mir488-201ENSMUST00000093595 109 ntBASIC1.6□□□□□ -2.15
DffbO54788 Mir1298-201ENSMUST00000116681 98 ntBASIC1.59□□□□□ -2.15
DffbO54788 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.59□□□□□ -2.15
DffbO54788 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.59□□□□□ -2.15
DffbO54788 Gm24559-201ENSMUST00000157519 121 ntBASIC1.59□□□□□ -2.15
DffbO54788 Mir1931-201ENSMUST00000158589 119 ntBASIC1.59□□□□□ -2.15
DffbO54788 Gm25716-201ENSMUST00000158628 104 ntBASIC1.59□□□□□ -2.15
DffbO54788 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.59□□□□□ -2.15
DffbO54788 Gm22699-201ENSMUST00000175376 105 ntBASIC1.59□□□□□ -2.15
DffbO54788 Gm24656-201ENSMUST00000177548 132 ntBASIC1.59□□□□□ -2.15
DffbO54788 Mir6901-201ENSMUST00000185062 62 ntBASIC1.59□□□□□ -2.15
DffbO54788 Mir8090-201ENSMUST00000185078 136 ntBASIC1.59□□□□□ -2.15
DffbO54788 Gm42855-201ENSMUST00000197388 253 ntBASIC1.59□□□□□ -2.15
DffbO54788 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.59□□□□□ -2.15
DffbO54788 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.59□□□□□ -2.15
DffbO54788 Gm26018-201ENSMUST00000104406 128 ntBASIC1.58□□□□□ -2.16
DffbO54788 Gm14567-201ENSMUST00000117155 174 ntBASIC1.58□□□□□ -2.16
DffbO54788 Gm26049-201ENSMUST00000157313 108 ntBASIC1.58□□□□□ -2.16
DffbO54788 Gm22842-201ENSMUST00000157709 118 ntBASIC1.58□□□□□ -2.16
DffbO54788 Gm22803-201ENSMUST00000158049 283 ntBASIC1.58□□□□□ -2.16
DffbO54788 Gm26360-201ENSMUST00000158872 103 ntBASIC1.58□□□□□ -2.16
DffbO54788 Gm5900-201ENSMUST00000179862 375 ntBASIC1.58□□□□□ -2.16
DffbO54788 Gm27672-201ENSMUST00000183751 204 ntBASIC1.58□□□□□ -2.16
DffbO54788 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.58□□□□□ -2.16
DffbO54788 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.58□□□□□ -2.16
DffbO54788 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
DffbO54788 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.57□□□□□ -2.16
DffbO54788 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.57□□□□□ -2.16
DffbO54788 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
DffbO54788 Gm24171-201ENSMUST00000104126 131 ntBASIC1.57□□□□□ -2.16
DffbO54788 Gm23772-201ENSMUST00000104433 102 ntBASIC1.57□□□□□ -2.16
DffbO54788 Gm11792-201ENSMUST00000120640 168 ntBASIC1.57□□□□□ -2.16
DffbO54788 Gm22946-201ENSMUST00000158558 82 ntBASIC1.57□□□□□ -2.16
DffbO54788 Gm22139-201ENSMUST00000158747 105 ntBASIC1.57□□□□□ -2.16
DffbO54788 Gm25750-201ENSMUST00000175483 112 ntBASIC1.57□□□□□ -2.16
DffbO54788 Mir6406-201ENSMUST00000183592 120 ntBASIC1.57□□□□□ -2.16
DffbO54788 Mir7017-201ENSMUST00000184894 62 ntBASIC1.57□□□□□ -2.16
DffbO54788 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
DffbO54788 Gm44464-201ENSMUST00000198010 138 ntBASIC1.57□□□□□ -2.16
DffbO54788 Gm44320-201ENSMUST00000199276 86 ntBASIC1.57□□□□□ -2.16
DffbO54788 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.57□□□□□ -2.16
DffbO54788 Gm25855-201ENSMUST00000082787 72 ntBASIC1.57□□□□□ -2.16
DffbO54788 Gm22738-201ENSMUST00000083440 147 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms