Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm45754-201ENSMUST00000212380 279 ntBASIC1.73□□□□□ -2.13
Capn1O35350 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.73□□□□□ -2.13
Capn1O35350 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.73□□□□□ -2.13
Capn1O35350 Gm24523-201ENSMUST00000083965 132 ntBASIC1.73□□□□□ -2.13
Capn1O35350 Mir490-201ENSMUST00000093567 84 ntBASIC1.73□□□□□ -2.13
Capn1O35350 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.72□□□□□ -2.13
Capn1O35350 Gm24171-201ENSMUST00000104126 131 ntBASIC1.72□□□□□ -2.13
Capn1O35350 Gm24222-201ENSMUST00000158834 93 ntBASIC1.72□□□□□ -2.13
Capn1O35350 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.72□□□□□ -2.13
Capn1O35350 Gm24656-201ENSMUST00000177548 132 ntBASIC1.72□□□□□ -2.13
Capn1O35350 Mir7679-201ENSMUST00000183379 63 ntBASIC1.72□□□□□ -2.13
Capn1O35350 Gm28669-201ENSMUST00000188400 100 ntBASIC1.72□□□□□ -2.13
Capn1O35350 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.72□□□□□ -2.13
Capn1O35350 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.72□□□□□ -2.13
Capn1O35350 Gm23377-201ENSMUST00000082943 126 ntBASIC1.72□□□□□ -2.13
Capn1O35350 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.71□□□□□ -2.14
Capn1O35350 Mir544-201ENSMUST00000103813 78 ntBASIC1.71□□□□□ -2.14
Capn1O35350 Gm25938-201ENSMUST00000104139 166 ntBASIC1.71□□□□□ -2.14
Capn1O35350 Gm25541-201ENSMUST00000116888 126 ntBASIC1.71□□□□□ -2.14
Capn1O35350 Gm15069-201ENSMUST00000117792 192 ntBASIC1.71□□□□□ -2.14
Capn1O35350 Gm15068-201ENSMUST00000119796 192 ntBASIC1.71□□□□□ -2.14
Capn1O35350 Mir5104-201ENSMUST00000175319 94 ntBASIC1.71□□□□□ -2.14
Capn1O35350 Gm24276-201ENSMUST00000102181 110 ntBASIC1.7□□□□□ -2.14
Capn1O35350 Gm25090-201ENSMUST00000104000 132 ntBASIC1.7□□□□□ -2.14
Capn1O35350 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.7□□□□□ -2.14
Capn1O35350 Gm23289-201ENSMUST00000175615 108 ntBASIC1.7□□□□□ -2.14
Capn1O35350 Mir6352-201ENSMUST00000184495 116 ntBASIC1.7□□□□□ -2.14
Capn1O35350 Gm37746-201ENSMUST00000193249 198 ntBASIC1.7□□□□□ -2.14
Capn1O35350 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Capn1O35350 Gm6952-201ENSMUST00000118629 159 ntBASIC1.69□□□□□ -2.14
Capn1O35350 Gm22163-201ENSMUST00000158408 135 ntBASIC1.69□□□□□ -2.14
Capn1O35350 Gm6003-201ENSMUST00000187903 463 ntBASIC1.69□□□□□ -2.14
Capn1O35350 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.69□□□□□ -2.14
Capn1O35350 Gm22884-201ENSMUST00000083127 140 ntBASIC1.69□□□□□ -2.14
Capn1O35350 Gm25895-201ENSMUST00000083714 100 ntBASIC1.69□□□□□ -2.14
Capn1O35350 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Capn1O35350 Gm25943-201ENSMUST00000103791 90 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Gm22387-201ENSMUST00000158191 131 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Gm25051-201ENSMUST00000158602 249 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Mir3061-201ENSMUST00000175129 91 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Gm25285-201ENSMUST00000178951 90 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Gm27898-201ENSMUST00000183987 80 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Mir6905-201ENSMUST00000184228 70 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Mir7678-201ENSMUST00000185076 71 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Mir7116-201ENSMUST00000195956 70 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Gm44408-201ENSMUST00000200205 66 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Gm46993-201ENSMUST00000220708 259 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Gm24929-201ENSMUST00000083403 139 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Gm22743-201ENSMUST00000083445 133 ntBASIC1.68□□□□□ -2.14
Capn1O35350 Gm24132-201ENSMUST00000104745 91 ntBASIC1.67□□□□□ -2.14
Capn1O35350 Gm13246-201ENSMUST00000120994 315 ntBASIC1.67□□□□□ -2.14
Capn1O35350 Gm25323-201ENSMUST00000122555 103 ntBASIC1.67□□□□□ -2.14
Capn1O35350 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Capn1O35350 Gm22403-201ENSMUST00000174919 84 ntBASIC1.67□□□□□ -2.14
Capn1O35350 Gm22929-201ENSMUST00000175517 107 ntBASIC1.67□□□□□ -2.14
Capn1O35350 Mir7675-201ENSMUST00000184262 58 ntBASIC1.67□□□□□ -2.14
Capn1O35350 Gm27694-201ENSMUST00000184740 86 ntBASIC1.67□□□□□ -2.14
Capn1O35350 Gm26293-201ENSMUST00000104170 84 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Gm25565-201ENSMUST00000104605 105 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Gm14671-201ENSMUST00000121790 262 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Gm23419-201ENSMUST00000175523 84 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Gm22259-201ENSMUST00000178926 107 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Gm22621-201ENSMUST00000179678 74 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Gm24415-201ENSMUST00000180218 107 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Mir6350-201ENSMUST00000183639 105 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Mir7241-201ENSMUST00000184532 64 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Gm27544-201ENSMUST00000185069 155 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.66□□□□□ -2.14
Capn1O35350 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.66□□□□□ -2.14
Capn1O35350 Gm23299-201ENSMUST00000082708 79 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Snord1a-201ENSMUST00000083160 74 ntBASIC1.66□□□□□ -2.14
Capn1O35350 BC022960-201ENSMUST00000119987 1815 ntBASIC1.66□□□□□ -2.14
Capn1O35350 Mir880-201ENSMUST00000104809 78 ntBASIC1.65□□□□□ -2.15
Capn1O35350 Gm11856-201ENSMUST00000118712 276 ntBASIC1.65□□□□□ -2.15
Capn1O35350 Gm13922-201ENSMUST00000119505 156 ntBASIC1.65□□□□□ -2.15
Capn1O35350 Gm11334-201ENSMUST00000121969 156 ntBASIC1.65□□□□□ -2.15
Capn1O35350 Gm24000-201ENSMUST00000158063 89 ntBASIC1.65□□□□□ -2.15
Capn1O35350 Gm25464-201ENSMUST00000175481 107 ntBASIC1.65□□□□□ -2.15
Capn1O35350 Gm24638-201ENSMUST00000179807 132 ntBASIC1.65□□□□□ -2.15
Capn1O35350 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.65□□□□□ -2.15
Capn1O35350 Gm24762-201ENSMUST00000083689 104 ntBASIC1.65□□□□□ -2.15
Capn1O35350 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Capn1O35350 Gm25878-201ENSMUST00000104327 93 ntBASIC1.64□□□□□ -2.15
Capn1O35350 Gm22477-201ENSMUST00000122569 316 ntBASIC1.64□□□□□ -2.15
Capn1O35350 Gm22603-201ENSMUST00000157603 96 ntBASIC1.64□□□□□ -2.15
Capn1O35350 Gm22556-201ENSMUST00000157803 100 ntBASIC1.64□□□□□ -2.15
Capn1O35350 Gm22888-201ENSMUST00000158640 77 ntBASIC1.64□□□□□ -2.15
Capn1O35350 Gm27465-201ENSMUST00000184290 91 ntBASIC1.64□□□□□ -2.15
Capn1O35350 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Capn1O35350 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.64□□□□□ -2.15
Capn1O35350 Mir3087-201ENSMUST00000199405 56 ntBASIC1.64□□□□□ -2.15
Capn1O35350 Gm44921-201ENSMUST00000205290 301 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 219 ms