Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.22□□□□□ -2.05
Gm28043E0CXC2 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.22□□□□□ -2.05
Gm28043E0CXC2 Gm24656-201ENSMUST00000177548 132 ntBASIC2.22□□□□□ -2.05
Gm28043E0CXC2 Gm23567-201ENSMUST00000178005 107 ntBASIC2.22□□□□□ -2.05
Gm28043E0CXC2 Gm37545-201ENSMUST00000186512 148 ntBASIC2.22□□□□□ -2.05
Gm28043E0CXC2 Gm25136-201ENSMUST00000083253 115 ntBASIC2.22□□□□□ -2.05
Gm28043E0CXC2 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.22□□□□□ -2.05
Gm28043E0CXC2 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Gm28043E0CXC2 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Gm28043E0CXC2 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Gm24068-201ENSMUST00000104513 132 ntBASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Gm24937-201ENSMUST00000122597 134 ntBASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Gm25071-201ENSMUST00000175232 70 ntBASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Gm43381-201ENSMUST00000198553 165 ntBASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Mir7217-201ENSMUST00000200304 62 ntBASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Gm44976-201ENSMUST00000205543 261 ntBASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Gm18502-201ENSMUST00000218679 199 ntBASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Mir201-201ENSMUST00000083470 66 ntBASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Gm28043E0CXC2 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Gm28043E0CXC2 Gm25882-201ENSMUST00000157784 85 ntBASIC2.2□□□□□ -2.06
Gm28043E0CXC2 Gm24000-201ENSMUST00000158063 89 ntBASIC2.2□□□□□ -2.06
Gm28043E0CXC2 Gm27369-201ENSMUST00000185182 71 ntBASIC2.2□□□□□ -2.06
Gm28043E0CXC2 Mir3969-201ENSMUST00000197106 92 ntBASIC2.2□□□□□ -2.06
Gm28043E0CXC2 Gm45544-201ENSMUST00000211130 88 ntBASIC2.2□□□□□ -2.06
Gm28043E0CXC2 Gm23722-201ENSMUST00000083002 130 ntBASIC2.2□□□□□ -2.06
Gm28043E0CXC2 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.19□□□□□ -2.06
Gm28043E0CXC2 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.19□□□□□ -2.06
Gm28043E0CXC2 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.19□□□□□ -2.06
Gm28043E0CXC2 Gm26415-201ENSMUST00000157673 292 ntBASIC2.19□□□□□ -2.06
Gm28043E0CXC2 Gm22888-201ENSMUST00000158640 77 ntBASIC2.19□□□□□ -2.06
Gm28043E0CXC2 Gm25364-201ENSMUST00000158851 107 ntBASIC2.19□□□□□ -2.06
Gm28043E0CXC2 Gm26864-201ENSMUST00000181346 156 ntBASIC2.19□□□□□ -2.06
Gm28043E0CXC2 Gm24805-201ENSMUST00000082931 104 ntBASIC2.19□□□□□ -2.06
Gm28043E0CXC2 Gm23947-201ENSMUST00000093636 107 ntBASIC2.19□□□□□ -2.06
Gm28043E0CXC2 Gm22105-201ENSMUST00000116734 116 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Gm24900-201ENSMUST00000158128 134 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Gm24358-201ENSMUST00000158424 288 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Mir7039-201ENSMUST00000183852 85 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Mir6917-201ENSMUST00000184111 61 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Gm29613-201ENSMUST00000185846 313 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Gm29544-201ENSMUST00000188860 313 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Gm28808-201ENSMUST00000190978 313 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.18□□□□□ -2.06
Gm28043E0CXC2 AC154328.1-201ENSMUST00000225875 307 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Gm25588-201ENSMUST00000082501 140 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Gm22283-201ENSMUST00000082556 161 ntBASIC2.18□□□□□ -2.06
Gm28043E0CXC2 Gm26291-201ENSMUST00000158889 137 ntBASIC2.17□□□□□ -2.06
Gm28043E0CXC2 Gm21885-201ENSMUST00000178891 327 ntBASIC2.17□□□□□ -2.06
Gm28043E0CXC2 Gm5900-201ENSMUST00000179862 375 ntBASIC2.17□□□□□ -2.06
Gm28043E0CXC2 Mir7021-201ENSMUST00000197026 63 ntBASIC2.17□□□□□ -2.06
Gm28043E0CXC2 Gm8219-201ENSMUST00000218309 242 ntBASIC2.17□□□□□ -2.06
Gm28043E0CXC2 Gm23239-201ENSMUST00000083006 181 ntBASIC2.17□□□□□ -2.06
Gm28043E0CXC2 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Gm28043E0CXC2 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Gm25915-201ENSMUST00000104265 126 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Snord90-201ENSMUST00000104568 111 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Gm14709-201ENSMUST00000121225 304 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Gm15692-201ENSMUST00000152173 352 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Gm25980-201ENSMUST00000157176 218 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Gm24345-201ENSMUST00000158706 124 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Gm25750-201ENSMUST00000175483 112 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Gm28043E0CXC2 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Gm23100-201ENSMUST00000083455 141 ntBASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Gm28043E0CXC2 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
Gm28043E0CXC2 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Gm28043E0CXC2 Mir880-201ENSMUST00000104809 78 ntBASIC2.15□□□□□ -2.07
Gm28043E0CXC2 Gm11856-201ENSMUST00000118712 276 ntBASIC2.15□□□□□ -2.07
Gm28043E0CXC2 Gm25425-201ENSMUST00000157611 96 ntBASIC2.15□□□□□ -2.07
Gm28043E0CXC2 Gm25771-201ENSMUST00000158565 144 ntBASIC2.15□□□□□ -2.07
Gm28043E0CXC2 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.15□□□□□ -2.07
Gm28043E0CXC2 Gm27517-201ENSMUST00000184347 236 ntBASIC2.15□□□□□ -2.07
Gm28043E0CXC2 Gm44470-201ENSMUST00000203913 142 ntBASIC2.15□□□□□ -2.07
Gm28043E0CXC2 Snora69-201ENSMUST00000083708 131 ntBASIC2.15□□□□□ -2.07
Gm28043E0CXC2 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Gm28043E0CXC2 Gm18665-201ENSMUST00000189783 270 ntBASIC2.14□□□□□ -2.07
Gm28043E0CXC2 Gm44358-201ENSMUST00000196301 98 ntBASIC2.14□□□□□ -2.07
Gm28043E0CXC2 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.14□□□□□ -2.07
Gm28043E0CXC2 Gm25855-201ENSMUST00000082787 72 ntBASIC2.14□□□□□ -2.07
Gm28043E0CXC2 Snord61-201ENSMUST00000083176 71 ntBASIC2.14□□□□□ -2.07
Gm28043E0CXC2 Gm10172-201ENSMUST00000085929 558 ntBASIC2.14□□□□□ -2.07
Gm28043E0CXC2 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Gm28043E0CXC2 Gm22790-201ENSMUST00000157229 129 ntBASIC2.13□□□□□ -2.07
Gm28043E0CXC2 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Gm28043E0CXC2 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
Gm28043E0CXC2 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.12□□□□□ -2.07
Gm28043E0CXC2 Mir669b-201ENSMUST00000102172 97 ntBASIC2.12□□□□□ -2.07
Gm28043E0CXC2 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.12□□□□□ -2.07
Gm28043E0CXC2 Gm25035-201ENSMUST00000175414 77 ntBASIC2.12□□□□□ -2.07
Gm28043E0CXC2 Gm26337-201ENSMUST00000178000 79 ntBASIC2.12□□□□□ -2.07
Gm28043E0CXC2 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.12□□□□□ -2.07
Gm28043E0CXC2 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Gm28043E0CXC2 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Gm28043E0CXC2 Gm23813-201ENSMUST00000175153 77 ntBASIC2.11□□□□□ -2.07
Gm28043E0CXC2 Gm26073-201ENSMUST00000179906 127 ntBASIC2.11□□□□□ -2.07
Gm28043E0CXC2 Mir7062-201ENSMUST00000185038 66 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms