Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm22866-201ENSMUST00000083947 177 ntBASIC1.45□□□□□ -2.18
Shank1D3YZU1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Shank1D3YZU1 Gm25321-201ENSMUST00000122558 102 ntBASIC1.44□□□□□ -2.18
Shank1D3YZU1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.44□□□□□ -2.18
Shank1D3YZU1 Gm24624-201ENSMUST00000082617 164 ntBASIC1.44□□□□□ -2.18
Shank1D3YZU1 Gm25142-201ENSMUST00000082698 107 ntBASIC1.44□□□□□ -2.18
Shank1D3YZU1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.44□□□□□ -2.18
Shank1D3YZU1 Gm26181-201ENSMUST00000157687 106 ntBASIC1.44□□□□□ -2.18
Shank1D3YZU1 Gm25958-201ENSMUST00000175114 71 ntBASIC1.44□□□□□ -2.18
Shank1D3YZU1 Gm3724-201ENSMUST00000197957 349 ntBASIC1.44□□□□□ -2.18
Shank1D3YZU1 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.44□□□□□ -2.18
Shank1D3YZU1 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.44□□□□□ -2.18
Shank1D3YZU1 Gm22148-201ENSMUST00000104445 107 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 Gm24783-201ENSMUST00000157639 100 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 Gm23665-201ENSMUST00000158054 62 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 Snord87-201ENSMUST00000175437 87 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 Gm16404-201ENSMUST00000177739 468 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 Gm14598-201ENSMUST00000180109 468 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 Gm14625-201ENSMUST00000180231 468 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 Mir721-201ENSMUST00000200230 88 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.43□□□□□ -2.18
Shank1D3YZU1 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.43□□□□□ -2.18
Shank1D3YZU1 Gm26154-201ENSMUST00000102339 96 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Gm25878-201ENSMUST00000104327 93 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Gm19790-201ENSMUST00000214414 251 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Gm24171-201ENSMUST00000104126 131 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Snord100-201ENSMUST00000116836 74 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Gm23083-201ENSMUST00000157851 116 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Gm27672-201ENSMUST00000183751 204 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Gm27493-201ENSMUST00000184128 78 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.42□□□□□ -2.18
Shank1D3YZU1 Gm16976-205ENSMUST00000227324 226 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 Gm22306-201ENSMUST00000082692 107 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 Gm25357-201ENSMUST00000082745 72 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 Mir302d-201ENSMUST00000083513 66 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 Mir200b-201ENSMUST00000083615 70 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Shank1D3YZU1 Gm23854-201ENSMUST00000158378 108 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 Gm25044-201ENSMUST00000158603 104 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 Gm23340-201ENSMUST00000158955 123 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.41□□□□□ -2.18
Shank1D3YZU1 Mir6962-201ENSMUST00000199512 63 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.41□□□□□ -2.18
Shank1D3YZU1 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.4□□□□□ -2.19
Shank1D3YZU1 Gm25825-201ENSMUST00000157091 124 ntBASIC1.4□□□□□ -2.19
Shank1D3YZU1 Gm24559-201ENSMUST00000157519 121 ntBASIC1.4□□□□□ -2.19
Shank1D3YZU1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.4□□□□□ -2.19
Shank1D3YZU1 Gm25976-201ENSMUST00000158695 130 ntBASIC1.4□□□□□ -2.19
Shank1D3YZU1 Gm24174-201ENSMUST00000158933 111 ntBASIC1.4□□□□□ -2.19
Shank1D3YZU1 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Shank1D3YZU1 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.4□□□□□ -2.19
Shank1D3YZU1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Shank1D3YZU1 Mir293-201ENSMUST00000104841 80 ntBASIC1.4□□□□□ -2.19
Shank1D3YZU1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Shank1D3YZU1 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.4□□□□□ -2.19
Shank1D3YZU1 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.39□□□□□ -2.19
Shank1D3YZU1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.39□□□□□ -2.19
Shank1D3YZU1 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Shank1D3YZU1 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.39□□□□□ -2.19
Shank1D3YZU1 Gm25996-201ENSMUST00000175393 117 ntBASIC1.39□□□□□ -2.19
Shank1D3YZU1 Gm44057-201ENSMUST00000204547 96 ntBASIC1.39□□□□□ -2.19
Shank1D3YZU1 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.39□□□□□ -2.19
Shank1D3YZU1 Gm23461-201ENSMUST00000083265 107 ntBASIC1.39□□□□□ -2.19
Shank1D3YZU1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Shank1D3YZU1 Snord71-201ENSMUST00000104361 85 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Gm15281-201ENSMUST00000125181 351 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Gm26482-201ENSMUST00000158015 62 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Mir7052-201ENSMUST00000184821 65 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Mir30d-201ENSMUST00000083503 82 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Gm24261-201ENSMUST00000083744 104 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Shank1D3YZU1 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Gm22469-201ENSMUST00000104118 133 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Gm24683-201ENSMUST00000104840 88 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Gm23718-201ENSMUST00000157350 307 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.38□□□□□ -2.19
Shank1D3YZU1 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.38□□□□□ -2.19
Shank1D3YZU1 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Shank1D3YZU1 Snord89-201ENSMUST00000104516 110 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm24902-201ENSMUST00000158126 123 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm24154-201ENSMUST00000175261 130 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm25730-201ENSMUST00000178753 165 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Mir6240-201ENSMUST00000184281 117 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm29613-201ENSMUST00000185846 313 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm29544-201ENSMUST00000188860 313 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm28808-201ENSMUST00000190978 313 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm44326-201ENSMUST00000198226 101 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Mir7217-201ENSMUST00000200304 62 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Mir301-201ENSMUST00000083655 86 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Mir107-201ENSMUST00000083660 87 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm14937-201ENSMUST00000119709 208 ntBASIC1.37□□□□□ -2.19
Shank1D3YZU1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms