Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Mir466o-201ENSMUST00000104832 84 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm12647-201ENSMUST00000118977 265 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Mir7013-201ENSMUST00000183540 72 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm27991-201ENSMUST00000184804 137 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm43897-201ENSMUST00000204019 309 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm45654-201ENSMUST00000210980 123 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm25090-201ENSMUST00000104000 132 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm22145-201ENSMUST00000157396 148 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm25839-201ENSMUST00000158921 103 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm23268-201ENSMUST00000175494 78 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm24656-201ENSMUST00000177548 132 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm24518-201ENSMUST00000180275 94 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Mir6395-201ENSMUST00000183885 91 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm22298-201ENSMUST00000082662 133 ntBASIC0.88□□□□□ -2.27
Hmcn1D3YXG0 Gm23320-201ENSMUST00000104462 127 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm13087-201ENSMUST00000118298 256 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm25108-201ENSMUST00000122473 78 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm22205-201ENSMUST00000122655 71 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm22361-201ENSMUST00000158435 176 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm28623-201ENSMUST00000187219 192 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm29192-201ENSMUST00000190942 377 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm42795-201ENSMUST00000198847 76 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 AC158523.1-201ENSMUST00000221398 328 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 AC159252.1-201ENSMUST00000224450 553 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm26439-201ENSMUST00000082592 106 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm23097-201ENSMUST00000083448 105 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm6985-201ENSMUST00000121255 271 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm14491-201ENSMUST00000121919 199 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm25903-201ENSMUST00000158492 103 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Igkv11-114-201ENSMUST00000200013 346 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm43038-201ENSMUST00000202359 88 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm25038-201ENSMUST00000082928 130 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm22672-201ENSMUST00000104414 134 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm24588-201ENSMUST00000116696 83 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm22197-201ENSMUST00000116866 58 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm25543-201ENSMUST00000122678 312 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm16354-201ENSMUST00000155376 150 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm24718-201ENSMUST00000157521 136 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm26186-201ENSMUST00000157689 125 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm22140-201ENSMUST00000158745 120 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Mir7242-201ENSMUST00000183710 79 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Mir6363-201ENSMUST00000184880 114 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Mir6376-201ENSMUST00000185149 131 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 AC160134.1-201ENSMUST00000213450 551 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm22443-201ENSMUST00000082890 107 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm24120-201ENSMUST00000103978 129 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm23202-201ENSMUST00000104376 129 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm22713-201ENSMUST00000116895 130 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm14287-201ENSMUST00000121060 117 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm24911-201ENSMUST00000157292 136 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm37431-201ENSMUST00000195102 111 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm45543-201ENSMUST00000209327 88 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm22622-201ENSMUST00000082870 129 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm25431-201ENSMUST00000101978 107 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm25094-201ENSMUST00000103992 131 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm14008-201ENSMUST00000120483 274 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm27686-201ENSMUST00000185123 91 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm27369-201ENSMUST00000185182 71 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm28409-201ENSMUST00000187064 103 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm43070-201ENSMUST00000196938 415 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm43717-201ENSMUST00000198684 310 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Gm24948-201ENSMUST00000082866 207 ntBASIC0.87□□□□□ -2.27
Hmcn1D3YXG0 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Mir297b-201ENSMUST00000102268 109 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm26479-201ENSMUST00000122620 106 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Mir3058-201ENSMUST00000175126 91 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm37692-201ENSMUST00000192633 232 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Mir28c-201ENSMUST00000200096 75 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm43295-201ENSMUST00000201439 412 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm44960-201ENSMUST00000207403 141 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 AC160114.1-201ENSMUST00000221930 365 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 LOC667541-201ENSMUST00000223408 278 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 AC109172.1-201ENSMUST00000227503 187 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm26077-201ENSMUST00000104064 123 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm14602-201ENSMUST00000118625 340 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm22602-201ENSMUST00000157596 95 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm25476-201ENSMUST00000175125 185 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm27944-201ENSMUST00000185155 103 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm28412-201ENSMUST00000187243 177 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Ighv1-6-201ENSMUST00000193849 293 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm44347-201ENSMUST00000199602 108 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm11786-201ENSMUST00000120799 155 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm8244-201ENSMUST00000121254 264 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Gm24016-201ENSMUST00000157726 68 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Trav5n-3-201ENSMUST00000164511 270 ntBASIC0.86□□□□□ -2.27
Hmcn1D3YXG0 Mir5127-201ENSMUST00000175295 71 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 265.5 ms