Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Mir880-201ENSMUST00000104809 78 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm25968-201ENSMUST00000157167 100 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm22113-201ENSMUST00000158343 104 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Mir1931-201ENSMUST00000158589 119 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm22887-201ENSMUST00000178586 107 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm44345-201ENSMUST00000199560 135 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm22283-201ENSMUST00000082556 161 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm22743-201ENSMUST00000083445 133 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm23142-201ENSMUST00000101848 105 ntBASIC0.24□□□□□ -2.37
Chd3B1AR17 Gm26240-201ENSMUST00000101893 105 ntBASIC0.24□□□□□ -2.37
Chd3B1AR17 Gm22791-201ENSMUST00000157232 145 ntBASIC0.24□□□□□ -2.37
Chd3B1AR17 Gm23379-201ENSMUST00000180026 107 ntBASIC0.24□□□□□ -2.37
Chd3B1AR17 Gm27365-201ENSMUST00000184041 177 ntBASIC0.24□□□□□ -2.37
Chd3B1AR17 Gm26329-201ENSMUST00000093723 110 ntBASIC0.24□□□□□ -2.37
Chd3B1AR17 Gm26303-201ENSMUST00000116845 119 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm22598-201ENSMUST00000157600 127 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Mir1951-201ENSMUST00000157981 89 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm25434-201ENSMUST00000158278 167 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm22435-201ENSMUST00000158552 128 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm22234-201ENSMUST00000174906 65 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Snora16a-202ENSMUST00000196061 137 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm44352-201ENSMUST00000196358 110 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Mir324-201ENSMUST00000083600 89 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm25878-201ENSMUST00000104327 93 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm22706-201ENSMUST00000157907 112 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Scarna8-201ENSMUST00000158333 131 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm24818-201ENSMUST00000175093 161 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm23148-201ENSMUST00000180367 107 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.23□□□□□ -2.37
Chd3B1AR17 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm25258-201ENSMUST00000083049 107 ntBASIC0.23□□□□□ -2.37
Chd3B1AR17 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Chd3B1AR17 Gm25802-201ENSMUST00000082639 77 ntBASIC0.22□□□□□ -2.37
Chd3B1AR17 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.22□□□□□ -2.37
Chd3B1AR17 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
Chd3B1AR17 Mir767-201ENSMUST00000103256 107 ntBASIC0.22□□□□□ -2.38
Chd3B1AR17 Gm26274-201ENSMUST00000157103 321 ntBASIC0.22□□□□□ -2.38
Chd3B1AR17 Gm23101-201ENSMUST00000157550 137 ntBASIC0.22□□□□□ -2.38
Chd3B1AR17 Gm23759-201ENSMUST00000158351 268 ntBASIC0.22□□□□□ -2.38
Chd3B1AR17 Gm26022-201ENSMUST00000158663 108 ntBASIC0.22□□□□□ -2.38
Chd3B1AR17 Gm24345-201ENSMUST00000158706 124 ntBASIC0.22□□□□□ -2.38
Chd3B1AR17 Gm28435-201ENSMUST00000185496 108 ntBASIC0.22□□□□□ -2.38
Chd3B1AR17 Gm25930-201ENSMUST00000082785 107 ntBASIC0.22□□□□□ -2.38
Chd3B1AR17 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Gm24283-201ENSMUST00000104233 107 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Gm15069-201ENSMUST00000117792 192 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Gm15068-201ENSMUST00000119796 192 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Gm22200-201ENSMUST00000158614 67 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Gm16539-201ENSMUST00000160086 327 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Gm27410-201ENSMUST00000183851 115 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Gm45403-201ENSMUST00000209453 276 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Gm23039-201ENSMUST00000083870 161 ntBASIC0.21□□□□□ -2.38
Chd3B1AR17 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.2□□□□□ -2.38
Chd3B1AR17 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Chd3B1AR17 Gm11798-201ENSMUST00000119150 421 ntBASIC0.2□□□□□ -2.38
Chd3B1AR17 Gm24909-201ENSMUST00000157290 280 ntBASIC0.2□□□□□ -2.38
Chd3B1AR17 Gm25450-201ENSMUST00000179144 107 ntBASIC0.2□□□□□ -2.38
Chd3B1AR17 Gm43624-201ENSMUST00000197368 180 ntBASIC0.2□□□□□ -2.38
Chd3B1AR17 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.2□□□□□ -2.38
Chd3B1AR17 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.2□□□□□ -2.38
Chd3B1AR17 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Chd3B1AR17 Gm14946-201ENSMUST00000119859 296 ntBASIC0.19□□□□□ -2.38
Chd3B1AR17 Gm27289-201ENSMUST00000183341 82 ntBASIC0.19□□□□□ -2.38
Chd3B1AR17 Gm36946-201ENSMUST00000192706 435 ntBASIC0.19□□□□□ -2.38
Chd3B1AR17 Gm44325-201ENSMUST00000196757 77 ntBASIC0.19□□□□□ -2.38
Chd3B1AR17 Gm5023-201ENSMUST00000217442 587 ntBASIC0.19□□□□□ -2.38
Chd3B1AR17 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.19□□□□□ -2.38
Chd3B1AR17 Gm22545-201ENSMUST00000104350 132 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Mir6365-201ENSMUST00000183990 101 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.18□□□□□ -2.38
Chd3B1AR17 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm11904-201ENSMUST00000120562 248 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm13560-201ENSMUST00000121865 329 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm24440-201ENSMUST00000157236 63 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm23232-201ENSMUST00000157300 105 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm26393-201ENSMUST00000157625 129 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm24512-201ENSMUST00000174963 65 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm43884-201ENSMUST00000204251 559 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.18□□□□□ -2.38
Chd3B1AR17 Gm12837-201ENSMUST00000120131 373 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm22801-201ENSMUST00000175624 84 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Mir6377-201ENSMUST00000183760 114 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm27539-201ENSMUST00000184971 224 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm26123-201ENSMUST00000083363 135 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm22368-201ENSMUST00000102416 109 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Snord89-201ENSMUST00000104516 110 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm14392-201ENSMUST00000120332 401 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm13341-201ENSMUST00000120780 672 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms