Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Gm23536-201ENSMUST00000157541 134 ntBASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 Gm23779-201ENSMUST00000157938 64 ntBASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 Gm28489-201ENSMUST00000186655 316 ntBASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 Gm28849-201ENSMUST00000188127 174 ntBASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 Gm44057-201ENSMUST00000204547 96 ntBASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 Gm29818-201ENSMUST00000218070 165 ntBASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 Gm22421-201ENSMUST00000083058 107 ntBASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 Gm26111-201ENSMUST00000083969 106 ntBASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Trav12-2A0N8N6 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm15002-201ENSMUST00000118406 452 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm6985-201ENSMUST00000121255 271 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm13577-201ENSMUST00000121365 205 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm25976-201ENSMUST00000158695 130 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm26116-201ENSMUST00000175600 77 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm22801-201ENSMUST00000175624 84 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm26073-201ENSMUST00000179906 127 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm44387-201ENSMUST00000196298 145 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm8219-201ENSMUST00000218309 242 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.26□□□□□ -2.37
Trav12-2A0N8N6 Gm22469-201ENSMUST00000104118 133 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Snord71-201ENSMUST00000104361 85 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Gm14307-201ENSMUST00000118930 291 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Gm14297-201ENSMUST00000129110 291 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Gm16362-201ENSMUST00000135189 214 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Mir1933-201ENSMUST00000158930 88 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Gm23416-201ENSMUST00000175520 95 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Gm44211-201ENSMUST00000204867 145 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Gm45544-201ENSMUST00000211130 88 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Mir10b-201ENSMUST00000083566 68 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Mir451a-201ENSMUST00000093557 72 ntBASIC0.25□□□□□ -2.37
Trav12-2A0N8N6 Gm25878-201ENSMUST00000104327 93 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm25773-201ENSMUST00000116718 127 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm24476-201ENSMUST00000157437 131 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm22814-201ENSMUST00000157452 104 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm24192-201ENSMUST00000157978 145 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm22983-201ENSMUST00000158308 104 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm24498-201ENSMUST00000158445 102 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm23008-201ENSMUST00000158946 80 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Mir7093-201ENSMUST00000184195 101 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Snora20-201ENSMUST00000082703 128 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm24527-201ENSMUST00000082920 107 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm24043-201ENSMUST00000083108 116 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Gm26495-201ENSMUST00000083152 137 ntBASIC0.24□□□□□ -2.37
Trav12-2A0N8N6 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Gm24629-201ENSMUST00000122762 89 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Gm22085-201ENSMUST00000158344 110 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Gm22565-201ENSMUST00000175540 69 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Gm26285-201ENSMUST00000177923 107 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Gm23622-201ENSMUST00000082460 107 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Snord42a-201ENSMUST00000082606 65 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Gm23412-201ENSMUST00000083017 107 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Mir30a-201ENSMUST00000083471 71 ntBASIC0.23□□□□□ -2.37
Trav12-2A0N8N6 Gm25538-201ENSMUST00000101943 107 ntBASIC0.22□□□□□ -2.37
Trav12-2A0N8N6 Gm12837-201ENSMUST00000120131 373 ntBASIC0.22□□□□□ -2.37
Trav12-2A0N8N6 Gm6272-201ENSMUST00000121256 171 ntBASIC0.22□□□□□ -2.37
Trav12-2A0N8N6 Gm22706-201ENSMUST00000157907 112 ntBASIC0.22□□□□□ -2.37
Trav12-2A0N8N6 Mir6350-201ENSMUST00000183639 105 ntBASIC0.22□□□□□ -2.37
Trav12-2A0N8N6 Gm45541-201ENSMUST00000210443 54 ntBASIC0.22□□□□□ -2.37
Trav12-2A0N8N6 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.22□□□□□ -2.37
Trav12-2A0N8N6 Gm23404-201ENSMUST00000082543 97 ntBASIC0.22□□□□□ -2.37
Trav12-2A0N8N6 Rny3-201ENSMUST00000083011 102 ntBASIC0.22□□□□□ -2.37
Trav12-2A0N8N6 Gm11248-201ENSMUST00000119568 201 ntBASIC0.21□□□□□ -2.38
Trav12-2A0N8N6 Gm22321-201ENSMUST00000157152 104 ntBASIC0.21□□□□□ -2.38
Trav12-2A0N8N6 Gm26090-201ENSMUST00000157897 128 ntBASIC0.21□□□□□ -2.38
Trav12-2A0N8N6 Gm16307-201ENSMUST00000161269 210 ntBASIC0.21□□□□□ -2.38
Trav12-2A0N8N6 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.21□□□□□ -2.38
Trav12-2A0N8N6 Gm23571-201ENSMUST00000180073 127 ntBASIC0.21□□□□□ -2.38
Trav12-2A0N8N6 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.21□□□□□ -2.38
Trav12-2A0N8N6 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.21□□□□□ -2.38
Trav12-2A0N8N6 Gm14671-201ENSMUST00000121790 262 ntBASIC0.2□□□□□ -2.38
Trav12-2A0N8N6 Gm23982-201ENSMUST00000157141 106 ntBASIC0.2□□□□□ -2.38
Trav12-2A0N8N6 Gm25044-201ENSMUST00000158603 104 ntBASIC0.2□□□□□ -2.38
Trav12-2A0N8N6 Gm27475-201ENSMUST00000183420 61 ntBASIC0.2□□□□□ -2.38
Trav12-2A0N8N6 Mir7065-201ENSMUST00000185110 61 ntBASIC0.2□□□□□ -2.38
Trav12-2A0N8N6 Gm28927-201ENSMUST00000191528 272 ntBASIC0.2□□□□□ -2.38
Trav12-2A0N8N6 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
Trav12-2A0N8N6 Gm26415-201ENSMUST00000157673 292 ntBASIC0.19□□□□□ -2.38
Trav12-2A0N8N6 Gm24015-201ENSMUST00000157725 232 ntBASIC0.19□□□□□ -2.38
Trav12-2A0N8N6 Gm27717-201ENSMUST00000183933 151 ntBASIC0.19□□□□□ -2.38
Trav12-2A0N8N6 Gm44055-201ENSMUST00000204376 247 ntBASIC0.19□□□□□ -2.38
Trav12-2A0N8N6 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.19□□□□□ -2.38
Trav12-2A0N8N6 Gm24453-201ENSMUST00000083346 76 ntBASIC0.19□□□□□ -2.38
Trav12-2A0N8N6 Gm26474-201ENSMUST00000116762 122 ntBASIC0.18□□□□□ -2.38
Trav12-2A0N8N6 Gm23991-201ENSMUST00000117033 93 ntBASIC0.18□□□□□ -2.38
Trav12-2A0N8N6 Gm15289-201ENSMUST00000117793 244 ntBASIC0.18□□□□□ -2.38
Trav12-2A0N8N6 Gm25318-201ENSMUST00000122554 314 ntBASIC0.18□□□□□ -2.38
Trav12-2A0N8N6 Gm25882-201ENSMUST00000157784 85 ntBASIC0.18□□□□□ -2.38
Trav12-2A0N8N6 Gm22387-201ENSMUST00000158191 131 ntBASIC0.18□□□□□ -2.38
Trav12-2A0N8N6 Gm24547-201ENSMUST00000158649 149 ntBASIC0.18□□□□□ -2.38
Trav12-2A0N8N6 Gm16546-201ENSMUST00000159442 355 ntBASIC0.18□□□□□ -2.38
Trav12-2A0N8N6 Gm44419-201ENSMUST00000203338 229 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 191.6 ms