Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm22801-201ENSMUST00000175624 84 ntBASIC0.24□□□□□ -2.37
Trav11A0A0B4J1J9 Mir6540-201ENSMUST00000184886 108 ntBASIC0.24□□□□□ -2.37
Trav11A0A0B4J1J9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Trav11A0A0B4J1J9 Gm44057-201ENSMUST00000204547 96 ntBASIC0.24□□□□□ -2.37
Trav11A0A0B4J1J9 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.24□□□□□ -2.37
Trav11A0A0B4J1J9 Gm24527-201ENSMUST00000082920 107 ntBASIC0.24□□□□□ -2.37
Trav11A0A0B4J1J9 Snord71-201ENSMUST00000104361 85 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Gm15002-201ENSMUST00000118406 452 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Gm25901-201ENSMUST00000158494 130 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Mir1933-201ENSMUST00000158930 88 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Gm23416-201ENSMUST00000175520 95 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Gm26073-201ENSMUST00000179906 127 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Gm29818-201ENSMUST00000218070 165 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Gm8219-201ENSMUST00000218309 242 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.23□□□□□ -2.37
Trav11A0A0B4J1J9 Gm25878-201ENSMUST00000104327 93 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm14307-201ENSMUST00000118930 291 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm14297-201ENSMUST00000129110 291 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm16362-201ENSMUST00000135189 214 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm24476-201ENSMUST00000157437 131 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm23672-201ENSMUST00000157471 107 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm24192-201ENSMUST00000157978 145 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm23340-201ENSMUST00000158955 123 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm45544-201ENSMUST00000211130 88 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm23377-201ENSMUST00000082943 126 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Mir30a-201ENSMUST00000083471 71 ntBASIC0.22□□□□□ -2.37
Trav11A0A0B4J1J9 Gm25773-201ENSMUST00000116718 127 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm6272-201ENSMUST00000121256 171 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm22814-201ENSMUST00000157452 104 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm22706-201ENSMUST00000157907 112 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm23571-201ENSMUST00000180073 127 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Mir6350-201ENSMUST00000183639 105 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Mir7093-201ENSMUST00000184195 101 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm44387-201ENSMUST00000196298 145 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm23404-201ENSMUST00000082543 97 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Snora20-201ENSMUST00000082703 128 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm24043-201ENSMUST00000083108 116 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm26495-201ENSMUST00000083152 137 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Mir451a-201ENSMUST00000093557 72 ntBASIC0.21□□□□□ -2.38
Trav11A0A0B4J1J9 Gm12837-201ENSMUST00000120131 373 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Gm14671-201ENSMUST00000121790 262 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Gm24629-201ENSMUST00000122762 89 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Gm24498-201ENSMUST00000158445 102 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Gm16307-201ENSMUST00000161269 210 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Gm22565-201ENSMUST00000175540 69 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Gm45541-201ENSMUST00000210443 54 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Snord42a-201ENSMUST00000082606 65 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.2□□□□□ -2.38
Trav11A0A0B4J1J9 Gm25538-201ENSMUST00000101943 107 ntBASIC0.19□□□□□ -2.38
Trav11A0A0B4J1J9 Gm26090-201ENSMUST00000157897 128 ntBASIC0.19□□□□□ -2.38
Trav11A0A0B4J1J9 Gm22085-201ENSMUST00000158344 110 ntBASIC0.19□□□□□ -2.38
Trav11A0A0B4J1J9 Gm25044-201ENSMUST00000158603 104 ntBASIC0.19□□□□□ -2.38
Trav11A0A0B4J1J9 Gm7258-201ENSMUST00000179317 300 ntBASIC0.19□□□□□ -2.38
Trav11A0A0B4J1J9 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.19□□□□□ -2.38
Trav11A0A0B4J1J9 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.19□□□□□ -2.38
Trav11A0A0B4J1J9 Gm23412-201ENSMUST00000083017 107 ntBASIC0.19□□□□□ -2.38
Trav11A0A0B4J1J9 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 Gm22321-201ENSMUST00000157152 104 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 Gm27475-201ENSMUST00000183420 61 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 Mir7065-201ENSMUST00000185110 61 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 Gm44055-201ENSMUST00000204376 247 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 Gm24453-201ENSMUST00000083346 76 ntBASIC0.18□□□□□ -2.38
Trav11A0A0B4J1J9 Gm23982-201ENSMUST00000157141 106 ntBASIC0.17□□□□□ -2.38
Trav11A0A0B4J1J9 Gm24015-201ENSMUST00000157725 232 ntBASIC0.17□□□□□ -2.38
Trav11A0A0B4J1J9 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.17□□□□□ -2.38
Trav11A0A0B4J1J9 Gm25814-201ENSMUST00000082754 107 ntBASIC0.17□□□□□ -2.38
Trav11A0A0B4J1J9 Rny3-201ENSMUST00000083011 102 ntBASIC0.17□□□□□ -2.38
Trav11A0A0B4J1J9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Trav11A0A0B4J1J9 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.17□□□□□ -2.38
Trav11A0A0B4J1J9 Gm15289-201ENSMUST00000117793 244 ntBASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm25318-201ENSMUST00000122554 314 ntBASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm26415-201ENSMUST00000157673 292 ntBASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm25882-201ENSMUST00000157784 85 ntBASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm22387-201ENSMUST00000158191 131 ntBASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm25300-201ENSMUST00000175284 84 ntBASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm28927-201ENSMUST00000191528 272 ntBASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm25820-201ENSMUST00000198589 127 ntBASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm44419-201ENSMUST00000203338 229 ntBASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Trav11A0A0B4J1J9 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.15□□□□□ -2.39
Trav11A0A0B4J1J9 Gm25110-201ENSMUST00000116684 121 ntBASIC0.15□□□□□ -2.39
Trav11A0A0B4J1J9 Gm25775-201ENSMUST00000116716 121 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms