Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm25069-201ENSMUST00000175238 86 ntBASIC0.85□□□□□ -2.27
Trbv3A0A0A6YYE2 Gm38274-201ENSMUST00000195689 148 ntBASIC0.85□□□□□ -2.27
Trbv3A0A0A6YYE2 Mir468-201ENSMUST00000197332 78 ntBASIC0.85□□□□□ -2.27
Trbv3A0A0A6YYE2 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.85□□□□□ -2.27
Trbv3A0A0A6YYE2 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.85□□□□□ -2.27
Trbv3A0A0A6YYE2 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Gm24594-201ENSMUST00000122502 99 ntBASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Gm22425-201ENSMUST00000158532 138 ntBASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Gm25362-201ENSMUST00000158854 105 ntBASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Gm16539-201ENSMUST00000160086 327 ntBASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Mir6336-201ENSMUST00000183581 130 ntBASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Mir6993-201ENSMUST00000184912 65 ntBASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Gm37715-201ENSMUST00000193206 235 ntBASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Gm22809-201ENSMUST00000082743 156 ntBASIC0.84□□□□□ -2.27
Trbv3A0A0A6YYE2 Gm15069-201ENSMUST00000117792 192 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm15068-201ENSMUST00000119796 192 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm11388-201ENSMUST00000120908 159 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm23048-201ENSMUST00000157237 129 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm22387-201ENSMUST00000158191 131 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm22264-201ENSMUST00000178200 107 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm27905-201ENSMUST00000184005 207 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir6380-201ENSMUST00000184334 81 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm38019-201ENSMUST00000195133 380 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir378a-201ENSMUST00000198300 66 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm45471-201ENSMUST00000211270 281 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Snord32a-201ENSMUST00000083285 83 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir33-201ENSMUST00000083531 69 ntBASIC0.83□□□□□ -2.28
Trbv3A0A0A6YYE2 Snord89-201ENSMUST00000104516 110 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm13246-201ENSMUST00000120994 315 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm23655-201ENSMUST00000122627 105 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm23466-201ENSMUST00000157133 106 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Snora20-201ENSMUST00000082703 128 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm22723-201ENSMUST00000083820 129 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm25683-201ENSMUST00000083940 131 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir451a-201ENSMUST00000093557 72 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.82□□□□□ -2.28
Trbv3A0A0A6YYE2 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm14882-201ENSMUST00000117216 218 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm24394-201ENSMUST00000158141 123 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm26358-201ENSMUST00000158215 97 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm25643-201ENSMUST00000158874 103 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm20630-201ENSMUST00000177387 551 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir6381-201ENSMUST00000183426 87 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir7063-201ENSMUST00000184158 91 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm27959-201ENSMUST00000185172 111 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm29490-201ENSMUST00000190923 342 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm44948-201ENSMUST00000209050 149 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.81□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm22544-201ENSMUST00000104349 127 ntBASIC0.8□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm14883-201ENSMUST00000120179 157 ntBASIC0.8□□□□□ -2.28
Trbv3A0A0A6YYE2 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm26090-201ENSMUST00000157897 128 ntBASIC0.8□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm25836-201ENSMUST00000158918 123 ntBASIC0.8□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir7226-201ENSMUST00000184953 60 ntBASIC0.8□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm44301-201ENSMUST00000200362 143 ntBASIC0.8□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.8□□□□□ -2.28
Trbv3A0A0A6YYE2 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir669o-201ENSMUST00000103898 96 ntBASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm12771-201ENSMUST00000120246 135 ntBASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm25397-201ENSMUST00000176951 92 ntBASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm25935-201ENSMUST00000178746 107 ntBASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm23963-201ENSMUST00000179603 77 ntBASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm45150-201ENSMUST00000206051 467 ntBASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm22686-201ENSMUST00000082847 100 ntBASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir695-201ENSMUST00000102261 109 ntBASIC0.78□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm24177-201ENSMUST00000158927 131 ntBASIC0.78□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir15a-201ENSMUST00000175266 84 ntBASIC0.78□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm16404-201ENSMUST00000177739 468 ntBASIC0.78□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm14598-201ENSMUST00000180109 468 ntBASIC0.78□□□□□ -2.28
Trbv3A0A0A6YYE2 Gm14625-201ENSMUST00000180231 468 ntBASIC0.78□□□□□ -2.28
Trbv3A0A0A6YYE2 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.78□□□□□ -2.28
Trbv3A0A0A6YYE2 DQ267101-201ENSMUST00000082562 73 ntBASIC0.78□□□□□ -2.28
Trbv3A0A0A6YYE2 Mir709-201ENSMUST00000102190 88 ntBASIC0.77□□□□□ -2.29
Trbv3A0A0A6YYE2 Gm26338-201ENSMUST00000102372 110 ntBASIC0.77□□□□□ -2.29
Trbv3A0A0A6YYE2 Gm45654-201ENSMUST00000210980 123 ntBASIC0.77□□□□□ -2.29
Trbv3A0A0A6YYE2 Gm25636-201ENSMUST00000082666 133 ntBASIC0.77□□□□□ -2.29
Trbv3A0A0A6YYE2 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Trbv3A0A0A6YYE2 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Trbv3A0A0A6YYE2 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.76□□□□□ -2.29
Trbv3A0A0A6YYE2 Gm24635-201ENSMUST00000122712 128 ntBASIC0.76□□□□□ -2.29
Trbv3A0A0A6YYE2 Gm22767-201ENSMUST00000158365 165 ntBASIC0.76□□□□□ -2.29
Trbv3A0A0A6YYE2 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Trbv3A0A0A6YYE2 Gm43512-201ENSMUST00000198495 176 ntBASIC0.76□□□□□ -2.29
Trbv3A0A0A6YYE2 Mir22-201ENSMUST00000083595 95 ntBASIC0.76□□□□□ -2.29
Trbv3A0A0A6YYE2 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Trbv3A0A0A6YYE2 Gm25323-201ENSMUST00000122555 103 ntBASIC0.75□□□□□ -2.29
Trbv3A0A0A6YYE2 Gm24015-201ENSMUST00000157725 232 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms