Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
H2afb2S4R1M3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.26□□□□□ -2.21
H2afb2S4R1M3 Gm22145-201ENSMUST00000157396 148 ntBASIC1.26□□□□□ -2.21
H2afb2S4R1M3 Gm24076-201ENSMUST00000158179 94 ntBASIC1.26□□□□□ -2.21
H2afb2S4R1M3 Gm27585-201ENSMUST00000183717 199 ntBASIC1.26□□□□□ -2.21
H2afb2S4R1M3 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.26□□□□□ -2.21
H2afb2S4R1M3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.26□□□□□ -2.21
H2afb2S4R1M3 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.26□□□□□ -2.21
H2afb2S4R1M3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm26080-201ENSMUST00000104069 131 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Snord70-201ENSMUST00000104157 87 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm24375-201ENSMUST00000104397 132 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm13797-201ENSMUST00000121792 120 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm23230-201ENSMUST00000157298 133 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm25390-201ENSMUST00000157341 103 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm23852-201ENSMUST00000158376 77 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm25654-201ENSMUST00000158467 88 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm24634-201ENSMUST00000158672 107 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm23194-201ENSMUST00000158813 105 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm24229-201ENSMUST00000158830 118 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm25730-201ENSMUST00000178753 165 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
H2afb2S4R1M3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm25697-201ENSMUST00000082902 98 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm25409-201ENSMUST00000083764 131 ntBASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
H2afb2S4R1M3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm11792-201ENSMUST00000120640 168 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm24594-201ENSMUST00000122502 99 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm23584-201ENSMUST00000157655 129 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm22553-201ENSMUST00000157797 295 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm23892-201ENSMUST00000158105 130 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm20630-201ENSMUST00000177387 551 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Mir3569-201ENSMUST00000185080 58 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm29308-201ENSMUST00000188863 315 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm38183-201ENSMUST00000193189 205 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm42719-201ENSMUST00000197393 355 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Mir211-201ENSMUST00000083651 106 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm24261-201ENSMUST00000083744 104 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
H2afb2S4R1M3 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm22195-201ENSMUST00000116861 108 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm23336-201ENSMUST00000117023 123 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm6897-201ENSMUST00000117714 138 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm14758-201ENSMUST00000119104 138 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm13801-201ENSMUST00000120750 160 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Mir1967-201ENSMUST00000157789 82 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm23113-201ENSMUST00000158477 99 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm24677-201ENSMUST00000158755 150 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm23289-201ENSMUST00000175615 108 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm28537-201ENSMUST00000189026 315 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm29631-201ENSMUST00000191065 315 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm25634-201ENSMUST00000082667 105 ntBASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
H2afb2S4R1M3 Gm26293-201ENSMUST00000104170 84 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm14838-201ENSMUST00000118913 248 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm12815-201ENSMUST00000121737 135 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm11204-201ENSMUST00000122438 147 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm23542-201ENSMUST00000158208 96 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm23258-201ENSMUST00000158319 106 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm25015-201ENSMUST00000158400 128 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm26468-201ENSMUST00000158644 106 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm25936-201ENSMUST00000179952 114 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm28344-201ENSMUST00000185704 279 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm23100-201ENSMUST00000083455 141 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Gm25627-201ENSMUST00000084003 153 ntBASIC1.22□□□□□ -2.21
H2afb2S4R1M3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
H2afb2S4R1M3 Gm24121-201ENSMUST00000102029 106 ntBASIC1.21□□□□□ -2.22
H2afb2S4R1M3 Gm23655-201ENSMUST00000122627 105 ntBASIC1.21□□□□□ -2.22
H2afb2S4R1M3 Gm26279-201ENSMUST00000157095 102 ntBASIC1.21□□□□□ -2.22
H2afb2S4R1M3 Gm24729-201ENSMUST00000158225 137 ntBASIC1.21□□□□□ -2.22
H2afb2S4R1M3 Gm25035-201ENSMUST00000175414 77 ntBASIC1.21□□□□□ -2.22
H2afb2S4R1M3 Gm25749-201ENSMUST00000175485 111 ntBASIC1.21□□□□□ -2.22
H2afb2S4R1M3 Gm42855-201ENSMUST00000197388 253 ntBASIC1.21□□□□□ -2.22
H2afb2S4R1M3 Gm44052-201ENSMUST00000203382 396 ntBASIC1.21□□□□□ -2.22
H2afb2S4R1M3 Mir223-201ENSMUST00000102112 110 ntBASIC1.2□□□□□ -2.22
H2afb2S4R1M3 Snord89-201ENSMUST00000104516 110 ntBASIC1.2□□□□□ -2.22
H2afb2S4R1M3 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.2□□□□□ -2.22
H2afb2S4R1M3 Gm22485-201ENSMUST00000157990 109 ntBASIC1.2□□□□□ -2.22
H2afb2S4R1M3 Gm26004-201ENSMUST00000158804 116 ntBASIC1.2□□□□□ -2.22
H2afb2S4R1M3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
H2afb2S4R1M3 Gm44326-201ENSMUST00000198226 101 ntBASIC1.2□□□□□ -2.22
H2afb2S4R1M3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.2□□□□□ -2.22
H2afb2S4R1M3 Mir384-201ENSMUST00000083565 88 ntBASIC1.2□□□□□ -2.22
H2afb2S4R1M3 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm22750-201ENSMUST00000102076 103 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm22545-201ENSMUST00000104350 132 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm23907-201ENSMUST00000104595 189 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 178.7 ms