Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm22738-201ENSMUST00000083440 147 ntBASIC1.89□□□□□ -2.11
H2afb3S4R1G7 Mir301-201ENSMUST00000083655 86 ntBASIC1.89□□□□□ -2.11
H2afb3S4R1G7 Snora69-201ENSMUST00000083708 131 ntBASIC1.89□□□□□ -2.11
H2afb3S4R1G7 Gm24698-201ENSMUST00000083883 130 ntBASIC1.89□□□□□ -2.11
H2afb3S4R1G7 Gm10351-201ENSMUST00000087694 125 ntBASIC1.89□□□□□ -2.11
H2afb3S4R1G7 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.88□□□□□ -2.11
H2afb3S4R1G7 Gm26339-201ENSMUST00000102368 99 ntBASIC1.88□□□□□ -2.11
H2afb3S4R1G7 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.88□□□□□ -2.11
H2afb3S4R1G7 Gm25980-201ENSMUST00000157176 218 ntBASIC1.88□□□□□ -2.11
H2afb3S4R1G7 Gm22163-201ENSMUST00000158408 135 ntBASIC1.88□□□□□ -2.11
H2afb3S4R1G7 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.88□□□□□ -2.11
H2afb3S4R1G7 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.88□□□□□ -2.11
H2afb3S4R1G7 Gm24616-201ENSMUST00000083274 139 ntBASIC1.88□□□□□ -2.11
H2afb3S4R1G7 Gm24449-201ENSMUST00000083985 106 ntBASIC1.88□□□□□ -2.11
H2afb3S4R1G7 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
H2afb3S4R1G7 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm26015-201ENSMUST00000104402 125 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm23651-201ENSMUST00000116755 120 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Snord100-201ENSMUST00000116836 74 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm24237-201ENSMUST00000157790 132 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm24770-201ENSMUST00000158505 92 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm22775-201ENSMUST00000177630 120 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm23569-201ENSMUST00000180120 120 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Mir6995-201ENSMUST00000183658 71 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm29613-201ENSMUST00000185846 313 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm29544-201ENSMUST00000188860 313 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm28808-201ENSMUST00000190978 313 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Mir3961-201ENSMUST00000198795 59 ntBASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
H2afb3S4R1G7 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Gm24984-201ENSMUST00000104454 133 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Gm23390-201ENSMUST00000157393 106 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Gm22966-201ENSMUST00000157957 129 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Gm23260-201ENSMUST00000158317 172 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Gm22159-201ENSMUST00000158412 130 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Gm22500-201ENSMUST00000158982 99 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Gm24333-201ENSMUST00000175101 84 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Mir7016-201ENSMUST00000184308 72 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Mir193a-201ENSMUST00000083461 66 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Mir93-201ENSMUST00000083593 88 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
H2afb3S4R1G7 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Gm26074-201ENSMUST00000104063 129 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Gm14567-201ENSMUST00000117155 174 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Gm24010-201ENSMUST00000157731 282 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Gm25460-201ENSMUST00000157954 127 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Gm25558-201ENSMUST00000158083 106 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Gm22768-201ENSMUST00000158366 153 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Gm25368-201ENSMUST00000158847 131 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Gm25627-201ENSMUST00000084003 153 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.85□□□□□ -2.11
H2afb3S4R1G7 Snord90-201ENSMUST00000104568 111 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Mir3096-201ENSMUST00000116685 71 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Gm24586-201ENSMUST00000116695 89 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Gm24141-201ENSMUST00000122776 115 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Gm22790-201ENSMUST00000157229 129 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Gm23548-201ENSMUST00000158963 106 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Mir6993-201ENSMUST00000184912 65 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Mir3969-201ENSMUST00000197106 92 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Gm23370-201ENSMUST00000199545 130 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Gm24038-201ENSMUST00000082872 159 ntBASIC1.84□□□□□ -2.11
H2afb3S4R1G7 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
H2afb3S4R1G7 Gm24232-201ENSMUST00000104314 132 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm26011-201ENSMUST00000104410 104 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm24274-201ENSMUST00000116787 124 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm13246-201ENSMUST00000120994 315 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm15281-201ENSMUST00000125181 351 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm25060-201ENSMUST00000157374 130 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm25882-201ENSMUST00000157784 85 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm26214-201ENSMUST00000158581 107 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm23342-201ENSMUST00000158958 115 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm27672-201ENSMUST00000183751 204 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm18665-201ENSMUST00000189783 270 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm44325-201ENSMUST00000196757 77 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm44464-201ENSMUST00000198010 138 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm25788-201ENSMUST00000082721 131 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm24461-201ENSMUST00000082735 103 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm23445-201ENSMUST00000082800 107 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Gm25697-201ENSMUST00000082902 98 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Snora33-201ENSMUST00000093556 129 ntBASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
H2afb3S4R1G7 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
H2afb3S4R1G7 Gm15069-201ENSMUST00000117792 192 ntBASIC1.82□□□□□ -2.12
H2afb3S4R1G7 Gm15068-201ENSMUST00000119796 192 ntBASIC1.82□□□□□ -2.12
H2afb3S4R1G7 Gm24559-201ENSMUST00000157519 121 ntBASIC1.82□□□□□ -2.12
H2afb3S4R1G7 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.82□□□□□ -2.12
H2afb3S4R1G7 Gm45492-201ENSMUST00000211611 288 ntBASIC1.82□□□□□ -2.12
H2afb3S4R1G7 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.82□□□□□ -2.12
H2afb3S4R1G7 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm24098-201ENSMUST00000102075 109 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms