Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm24640-201ENSMUST00000116949 126 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm22626-201ENSMUST00000116990 126 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm25783-201ENSMUST00000122525 190 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm23655-201ENSMUST00000122627 105 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm25730-201ENSMUST00000178753 165 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm24761-201ENSMUST00000179589 127 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm24488-201ENSMUST00000179934 127 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm25701-201ENSMUST00000179988 127 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm26431-201ENSMUST00000180199 127 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm27711-201ENSMUST00000183802 118 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm44052-201ENSMUST00000203382 396 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Gm25697-201ENSMUST00000082902 98 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Mir758-201ENSMUST00000103260 81 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Mir466p-201ENSMUST00000103925 89 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Gm24374-201ENSMUST00000104394 106 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Snord89-201ENSMUST00000104516 110 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Mir467g-201ENSMUST00000116906 120 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Gm23113-201ENSMUST00000158477 99 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Gm42719-201ENSMUST00000197393 355 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Gm44326-201ENSMUST00000198226 101 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Mir148b-201ENSMUST00000083626 97 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Gm24261-201ENSMUST00000083744 104 ntBASIC1.36□□□□□ -2.19
H2afb1S4R1E0 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Gm23907-201ENSMUST00000104595 189 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Gm22803-201ENSMUST00000158049 283 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Gm23545-201ENSMUST00000158205 104 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Mir3103-201ENSMUST00000175474 67 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Mir669k-201ENSMUST00000177742 127 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Gm25673-201ENSMUST00000179957 127 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Gm29308-201ENSMUST00000188863 315 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Gm25142-201ENSMUST00000082698 107 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Gm22723-201ENSMUST00000083820 129 ntBASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
H2afb1S4R1E0 Gm22761-201ENSMUST00000102278 96 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm11792-201ENSMUST00000120640 168 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm23665-201ENSMUST00000158054 62 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm22767-201ENSMUST00000158365 165 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm24229-201ENSMUST00000158830 118 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm25935-201ENSMUST00000178746 107 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm25936-201ENSMUST00000179952 114 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm28537-201ENSMUST00000189026 315 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm29631-201ENSMUST00000191065 315 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm46993-201ENSMUST00000220708 259 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 Gm25627-201ENSMUST00000084003 153 ntBASIC1.34□□□□□ -2.19
H2afb1S4R1E0 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.34□□□□□ -2.2
H2afb1S4R1E0 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
H2afb1S4R1E0 Gm24867-201ENSMUST00000104161 107 ntBASIC1.33□□□□□ -2.2
H2afb1S4R1E0 Gm25316-201ENSMUST00000116826 118 ntBASIC1.33□□□□□ -2.2
H2afb1S4R1E0 Gm22586-201ENSMUST00000157507 122 ntBASIC1.33□□□□□ -2.2
H2afb1S4R1E0 Gm25836-201ENSMUST00000158918 123 ntBASIC1.33□□□□□ -2.2
H2afb1S4R1E0 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.33□□□□□ -2.2
H2afb1S4R1E0 Mir6350-201ENSMUST00000183639 105 ntBASIC1.33□□□□□ -2.2
H2afb1S4R1E0 Gm37746-201ENSMUST00000193249 198 ntBASIC1.33□□□□□ -2.2
H2afb1S4R1E0 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
H2afb1S4R1E0 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.33□□□□□ -2.2
H2afb1S4R1E0 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.33□□□□□ -2.2
H2afb1S4R1E0 Gm25495-201ENSMUST00000104431 131 ntBASIC1.32□□□□□ -2.2
H2afb1S4R1E0 Gm15115-201ENSMUST00000121145 264 ntBASIC1.32□□□□□ -2.2
H2afb1S4R1E0 Gm22259-201ENSMUST00000178926 107 ntBASIC1.32□□□□□ -2.2
H2afb1S4R1E0 Gm6003-201ENSMUST00000187903 463 ntBASIC1.32□□□□□ -2.2
H2afb1S4R1E0 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
H2afb1S4R1E0 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.32□□□□□ -2.2
H2afb1S4R1E0 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.32□□□□□ -2.2
H2afb1S4R1E0 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm23950-201ENSMUST00000104026 129 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm25565-201ENSMUST00000104605 105 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm22051-201ENSMUST00000117002 127 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm23898-201ENSMUST00000158111 103 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm24677-201ENSMUST00000158755 150 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm26004-201ENSMUST00000158804 116 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm18433-201ENSMUST00000192747 197 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm42855-201ENSMUST00000197388 253 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm36189-201ENSMUST00000204113 523 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm45002-201ENSMUST00000208045 120 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Snord82-201ENSMUST00000082889 70 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm22744-201ENSMUST00000083444 65 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.31□□□□□ -2.2
H2afb1S4R1E0 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm25943-201ENSMUST00000103791 90 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm22545-201ENSMUST00000104350 132 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms