Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm23898-201ENSMUST00000158111 103 ntBASIC1.05□□□□□ -2.24
Trim3Q9R1R2 Gm22929-201ENSMUST00000175517 107 ntBASIC1.05□□□□□ -2.24
Trim3Q9R1R2 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.05□□□□□ -2.24
Trim3Q9R1R2 Gm29140-201ENSMUST00000190187 476 ntBASIC1.05□□□□□ -2.24
Trim3Q9R1R2 Gm43563-201ENSMUST00000196761 198 ntBASIC1.05□□□□□ -2.24
Trim3Q9R1R2 Gm43406-201ENSMUST00000200356 334 ntBASIC1.05□□□□□ -2.24
Trim3Q9R1R2 Gm45268-201ENSMUST00000210046 370 ntBASIC1.05□□□□□ -2.24
Trim3Q9R1R2 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm14923-201ENSMUST00000118270 155 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm11334-201ENSMUST00000121969 156 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm24777-201ENSMUST00000157644 107 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm26089-201ENSMUST00000157898 107 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm22097-201ENSMUST00000157929 278 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm25069-201ENSMUST00000175238 86 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm24154-201ENSMUST00000175261 130 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm22118-201ENSMUST00000175593 171 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm25615-201ENSMUST00000177836 94 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm21088-201ENSMUST00000190875 316 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Gm45313-201ENSMUST00000210584 178 ntBASIC1.04□□□□□ -2.24
Trim3Q9R1R2 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Mir669i-201ENSMUST00000117007 127 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm16032-201ENSMUST00000118534 168 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm22228-201ENSMUST00000157364 101 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm23194-201ENSMUST00000158813 105 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm22802-201ENSMUST00000175621 89 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm22450-201ENSMUST00000179641 107 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm25473-201ENSMUST00000180191 107 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Mir7091-201ENSMUST00000184075 79 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm20923-201ENSMUST00000190009 319 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm24856-201ENSMUST00000082809 107 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm22571-201ENSMUST00000082984 70 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm26071-201ENSMUST00000083261 107 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Gm24521-201ENSMUST00000083958 107 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Mir490-201ENSMUST00000093567 84 ntBASIC1.03□□□□□ -2.24
Trim3Q9R1R2 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
Trim3Q9R1R2 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trim3Q9R1R2 Gm26074-201ENSMUST00000104063 129 ntBASIC1.02□□□□□ -2.25
Trim3Q9R1R2 Gm26082-201ENSMUST00000104070 127 ntBASIC1.02□□□□□ -2.25
Trim3Q9R1R2 Gm24588-201ENSMUST00000116696 83 ntBASIC1.02□□□□□ -2.25
Trim3Q9R1R2 Gm25664-201ENSMUST00000157697 107 ntBASIC1.02□□□□□ -2.25
Trim3Q9R1R2 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trim3Q9R1R2 Gm28921-201ENSMUST00000190219 378 ntBASIC1.02□□□□□ -2.25
Trim3Q9R1R2 Gm29022-201ENSMUST00000190702 225 ntBASIC1.02□□□□□ -2.25
Trim3Q9R1R2 Gm44373-201ENSMUST00000196112 169 ntBASIC1.02□□□□□ -2.25
Trim3Q9R1R2 Gm24375-201ENSMUST00000104397 132 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Gm11904-201ENSMUST00000120562 248 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Gm23329-201ENSMUST00000157415 108 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Gm23113-201ENSMUST00000158477 99 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Mir6381-201ENSMUST00000183426 87 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Gm27419-201ENSMUST00000184576 109 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Mir7059-201ENSMUST00000184825 59 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Gm44055-201ENSMUST00000204376 247 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Gm26224-201ENSMUST00000082506 80 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Gm22884-201ENSMUST00000083127 140 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Gm24453-201ENSMUST00000083346 76 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Mir34a-201ENSMUST00000083559 102 ntBASIC1.01□□□□□ -2.25
Trim3Q9R1R2 Gm22233-201ENSMUST00000157464 114 ntBASIC1□□□□□ -2.25
Trim3Q9R1R2 Gm25868-201ENSMUST00000158253 114 ntBASIC1□□□□□ -2.25
Trim3Q9R1R2 Gm23760-201ENSMUST00000158350 116 ntBASIC1□□□□□ -2.25
Trim3Q9R1R2 Gm23419-201ENSMUST00000175523 84 ntBASIC1□□□□□ -2.25
Trim3Q9R1R2 Gm44358-201ENSMUST00000196301 98 ntBASIC1□□□□□ -2.25
Trim3Q9R1R2 AC154994.1-201ENSMUST00000217395 302 ntBASIC1□□□□□ -2.25
Trim3Q9R1R2 AC116460.1-201ENSMUST00000219040 313 ntBASIC1□□□□□ -2.25
Trim3Q9R1R2 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1□□□□□ -2.25
Trim3Q9R1R2 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1□□□□□ -2.25
Trim3Q9R1R2 Gm23571-201ENSMUST00000180073 127 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Gm24020-201ENSMUST00000180156 108 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Mir8119-201ENSMUST00000183371 129 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Mir6240-201ENSMUST00000184281 117 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Mir6540-201ENSMUST00000184886 108 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Snora19-201ENSMUST00000082962 132 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Gm23658-201ENSMUST00000083233 132 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Gm24523-201ENSMUST00000083965 132 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Gm10222-201ENSMUST00000088336 294 ntBASIC0.99□□□□□ -2.25
Trim3Q9R1R2 Gm22784-201ENSMUST00000104088 132 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Mir875-201ENSMUST00000104698 78 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Gm11856-201ENSMUST00000118712 276 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Gm23665-201ENSMUST00000158054 62 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Gm23542-201ENSMUST00000158208 96 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Gm23579-201ENSMUST00000158528 103 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Gm25768-201ENSMUST00000158570 98 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Mir3968-201ENSMUST00000175355 100 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Gm27747-201ENSMUST00000184707 85 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Gm25650-201ENSMUST00000083784 162 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.98□□□□□ -2.25
Trim3Q9R1R2 Gm12797-201ENSMUST00000118645 273 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Gm24942-201ENSMUST00000158328 114 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Gm24221-201ENSMUST00000158833 313 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Gm26287-201ENSMUST00000158887 81 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms