Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm43521-201ENSMUST00000197838 255 ntBASIC3.13□□□□□ -1.91
Prpf40aQ9R1C7 Gm43107-201ENSMUST00000198729 255 ntBASIC3.13□□□□□ -1.91
Prpf40aQ9R1C7 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.13□□□□□ -1.91
Prpf40aQ9R1C7 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Prpf40aQ9R1C7 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Gm26420-201ENSMUST00000104273 103 ntBASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Gm23470-201ENSMUST00000157129 120 ntBASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Gm22079-201ENSMUST00000157592 106 ntBASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Gm25470-201ENSMUST00000175576 111 ntBASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 AC126939.3-201ENSMUST00000226061 166 ntBASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Prpf40aQ9R1C7 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Gm23747-201ENSMUST00000104228 131 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Gm26088-201ENSMUST00000157896 131 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Gm25678-201ENSMUST00000174984 73 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Mir7081-201ENSMUST00000184490 75 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Gm43324-201ENSMUST00000197482 289 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Gm19855-201ENSMUST00000210145 249 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Gm23249-201ENSMUST00000083369 161 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.11□□□□□ -1.91
Prpf40aQ9R1C7 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3.1□□□□□ -1.91
Prpf40aQ9R1C7 BC022960-201ENSMUST00000119987 1815 ntBASIC3.1□□□□□ -1.91
Prpf40aQ9R1C7 Gm25376-201ENSMUST00000104340 133 ntBASIC3.1□□□□□ -1.91
Prpf40aQ9R1C7 Gm23911-201ENSMUST00000104596 134 ntBASIC3.1□□□□□ -1.91
Prpf40aQ9R1C7 Gm12013-201ENSMUST00000121971 155 ntBASIC3.1□□□□□ -1.91
Prpf40aQ9R1C7 Gm22858-201ENSMUST00000174972 76 ntBASIC3.1□□□□□ -1.91
Prpf40aQ9R1C7 Mir6353-201ENSMUST00000183596 113 ntBASIC3.1□□□□□ -1.91
Prpf40aQ9R1C7 Gm37330-201ENSMUST00000192606 153 ntBASIC3.1□□□□□ -1.91
Prpf40aQ9R1C7 Gm26326-201ENSMUST00000083070 129 ntBASIC3.1□□□□□ -1.91
Prpf40aQ9R1C7 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Prpf40aQ9R1C7 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.09□□□□□ -1.91
Prpf40aQ9R1C7 Mir547-201ENSMUST00000102051 78 ntBASIC3.09□□□□□ -1.91
Prpf40aQ9R1C7 Gm25091-201ENSMUST00000103997 71 ntBASIC3.09□□□□□ -1.91
Prpf40aQ9R1C7 Gm22796-201ENSMUST00000157234 106 ntBASIC3.09□□□□□ -1.91
Prpf40aQ9R1C7 Gm22768-201ENSMUST00000158366 153 ntBASIC3.09□□□□□ -1.91
Prpf40aQ9R1C7 Gm27527-201ENSMUST00000183903 99 ntBASIC3.09□□□□□ -1.91
Prpf40aQ9R1C7 Mir7k-201ENSMUST00000184115 110 ntBASIC3.09□□□□□ -1.91
Prpf40aQ9R1C7 Gm6109-201ENSMUST00000223297 348 ntBASIC3.09□□□□□ -1.91
Prpf40aQ9R1C7 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm26339-201ENSMUST00000102368 99 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm16171-201ENSMUST00000118004 324 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm26415-201ENSMUST00000157673 292 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm24877-201ENSMUST00000158779 116 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm24736-201ENSMUST00000158862 130 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Snord93-201ENSMUST00000175580 71 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm44325-201ENSMUST00000196757 77 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm24350-202ENSMUST00000198309 132 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm45544-201ENSMUST00000211130 88 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm30534-201ENSMUST00000217928 207 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Mir429-201ENSMUST00000083493 83 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Gm24261-201ENSMUST00000083744 104 ntBASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Prpf40aQ9R1C7 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Prpf40aQ9R1C7 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Prpf40aQ9R1C7 Gm22451-201ENSMUST00000122803 151 ntBASIC3.07□□□□□ -1.92
Prpf40aQ9R1C7 Gm25697-201ENSMUST00000082902 98 ntBASIC3.07□□□□□ -1.92
Prpf40aQ9R1C7 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Prpf40aQ9R1C7 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Prpf40aQ9R1C7 Mir450b-201ENSMUST00000102095 82 ntBASIC3.06□□□□□ -1.92
Prpf40aQ9R1C7 Gm15272-201ENSMUST00000120865 233 ntBASIC3.06□□□□□ -1.92
Prpf40aQ9R1C7 Gm16584-201ENSMUST00000159267 189 ntBASIC3.06□□□□□ -1.92
Prpf40aQ9R1C7 Trav5d-3-201ENSMUST00000170041 270 ntBASIC3.06□□□□□ -1.92
Prpf40aQ9R1C7 Gm28358-202ENSMUST00000189292 223 ntBASIC3.06□□□□□ -1.92
Prpf40aQ9R1C7 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Prpf40aQ9R1C7 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Prpf40aQ9R1C7 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.06□□□□□ -1.92
Prpf40aQ9R1C7 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Gm25466-201ENSMUST00000103995 132 ntBASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Gm22683-201ENSMUST00000082854 137 ntBASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Gm25628-201ENSMUST00000084002 105 ntBASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Prpf40aQ9R1C7 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 AC158598.2-201ENSMUST00000213397 3832 ntBASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Gm25407-201ENSMUST00000104102 134 ntBASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Gm24650-201ENSMUST00000157105 103 ntBASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Gm22845-201ENSMUST00000157712 104 ntBASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Gm23409-201ENSMUST00000158516 237 ntBASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Gm26215-201ENSMUST00000158584 139 ntBASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Gm24668-201ENSMUST00000158935 104 ntBASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Gm27446-201ENSMUST00000183963 89 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms