Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 AC151902.1-201ENSMUST00000227800 375 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm14298-201ENSMUST00000139032 237 ntBASIC-1.3□□□□□ -2.62
Scn11aQ9R053 Gm25384-201ENSMUST00000157807 105 ntBASIC-1.3□□□□□ -2.62
Scn11aQ9R053 Gm20543-201ENSMUST00000174200 726 ntBASIC-1.3□□□□□ -2.62
Scn11aQ9R053 Gm36189-201ENSMUST00000204113 523 ntBASIC-1.3□□□□□ -2.62
Scn11aQ9R053 Gm44865-201ENSMUST00000207240 531 ntBASIC-1.3□□□□□ -2.62
Scn11aQ9R053 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-1.3□□□□□ -2.62
Scn11aQ9R053 AC158981.3-202ENSMUST00000228906 523 ntBASIC-1.3□□□□□ -2.62
Scn11aQ9R053 Gm24610-201ENSMUST00000083270 109 ntBASIC-1.3□□□□□ -2.62
Scn11aQ9R053 Mir19a-201ENSMUST00000083482 82 ntBASIC-1.3□□□□□ -2.62
Scn11aQ9R053 Gm11798-201ENSMUST00000119150 421 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm15030-201ENSMUST00000119804 484 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm22966-201ENSMUST00000157957 129 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm24085-201ENSMUST00000175172 116 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm24168-201ENSMUST00000178825 107 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Mir6390-201ENSMUST00000184405 129 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm29535-201ENSMUST00000185723 109 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm28143-201ENSMUST00000191082 109 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 AC141438.3-201ENSMUST00000215632 202 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 AC122341.1-201ENSMUST00000227291 560 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm9593-201ENSMUST00000166034 469 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm44352-201ENSMUST00000196358 110 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.31□□□□□ -2.62
Scn11aQ9R053 Gm24836-201ENSMUST00000122609 108 ntBASIC-1.32□□□□□ -2.62
Scn11aQ9R053 Gm24199-201ENSMUST00000157808 136 ntBASIC-1.32□□□□□ -2.62
Scn11aQ9R053 Gm24084-201ENSMUST00000175173 137 ntBASIC-1.32□□□□□ -2.62
Scn11aQ9R053 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC-1.32□□□□□ -2.62
Scn11aQ9R053 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.33□□□□□ -2.62
Scn11aQ9R053 Gm25825-201ENSMUST00000157091 124 ntBASIC-1.33□□□□□ -2.62
Scn11aQ9R053 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-1.33□□□□□ -2.62
Scn11aQ9R053 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC-1.33□□□□□ -2.62
Scn11aQ9R053 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC-1.33□□□□□ -2.62
Scn11aQ9R053 CT025689.4-201ENSMUST00000225926 601 ntBASIC-1.33□□□□□ -2.62
Scn11aQ9R053 Gm24909-201ENSMUST00000157290 280 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm25444-201ENSMUST00000158999 113 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC-1.34□□□□□ -2.62
Scn11aQ9R053 AC159621.1-201ENSMUST00000223249 163 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Mir421-201ENSMUST00000083575 76 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm25294-201ENSMUST00000122791 104 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm24854-201ENSMUST00000158025 98 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-1.34□□□□□ -2.62
Scn11aQ9R053 Gm23032-201ENSMUST00000157995 107 ntBASIC-1.35□□□□□ -2.63
Scn11aQ9R053 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-1.35□□□□□ -2.63
Scn11aQ9R053 Gm37116-201ENSMUST00000195161 147 ntBASIC-1.35□□□□□ -2.63
Scn11aQ9R053 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-1.35□□□□□ -2.63
Scn11aQ9R053 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-1.35□□□□□ -2.63
Scn11aQ9R053 Mir10a-201ENSMUST00000083585 110 ntBASIC-1.35□□□□□ -2.63
Scn11aQ9R053 Gm22831-201ENSMUST00000102473 109 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm11575-201ENSMUST00000122243 228 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm24648-201ENSMUST00000157111 132 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm24784-201ENSMUST00000157640 62 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm24969-201ENSMUST00000180331 79 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Mir376b-201ENSMUST00000195930 82 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm22652-201ENSMUST00000083207 131 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm14536-201ENSMUST00000118324 138 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm14913-201ENSMUST00000120011 1093 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm15027-201ENSMUST00000120922 138 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm15061-201ENSMUST00000121076 1046 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm14671-201ENSMUST00000121790 262 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm22435-201ENSMUST00000158552 128 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm44419-201ENSMUST00000203338 229 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm44487-201ENSMUST00000205145 325 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 AC069561.2-201ENSMUST00000217596 420 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm24043-201ENSMUST00000083108 116 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Mir451a-201ENSMUST00000093557 72 ntBASIC-1.36□□□□□ -2.63
Scn11aQ9R053 Gm23078-201ENSMUST00000157848 148 ntBASIC-1.37□□□□□ -2.63
Scn11aQ9R053 Gm25160-201ENSMUST00000158914 102 ntBASIC-1.37□□□□□ -2.63
Scn11aQ9R053 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC-1.37□□□□□ -2.63
Scn11aQ9R053 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.37□□□□□ -2.63
Scn11aQ9R053 Gm45508-201ENSMUST00000209298 299 ntBASIC-1.37□□□□□ -2.63
Scn11aQ9R053 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC-1.37□□□□□ -2.63
Scn11aQ9R053 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC-1.38□□□□□ -2.63
Scn11aQ9R053 AC154282.1-201ENSMUST00000223154 265 ntBASIC-1.38□□□□□ -2.63
Scn11aQ9R053 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC-1.39□□□□□ -2.63
Scn11aQ9R053 Gm16358-201ENSMUST00000146046 210 ntBASIC-1.39□□□□□ -2.63
Scn11aQ9R053 Gm24000-201ENSMUST00000158063 89 ntBASIC-1.39□□□□□ -2.63
Scn11aQ9R053 Gm26233-201ENSMUST00000175530 70 ntBASIC-1.39□□□□□ -2.63
Scn11aQ9R053 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-1.39□□□□□ -2.63
Scn11aQ9R053 Gm5023-201ENSMUST00000217442 587 ntBASIC-1.39□□□□□ -2.63
Scn11aQ9R053 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.39□□□□□ -2.63
Scn11aQ9R053 Gm23862-201ENSMUST00000180342 94 ntBASIC-1.39□□□□□ -2.63
Scn11aQ9R053 Mir34a-201ENSMUST00000083559 102 ntBASIC-1.39□□□□□ -2.63
Scn11aQ9R053 Gm26384-201ENSMUST00000102183 110 ntBASIC-1.4□□□□□ -2.63
Scn11aQ9R053 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms