Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm46993-201ENSMUST00000220708 259 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm26107-201ENSMUST00000083972 107 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Mir500-201ENSMUST00000093600 92 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm22365-201ENSMUST00000093750 117 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm24375-201ENSMUST00000104397 132 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Gm12785-201ENSMUST00000122052 172 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Gm24504-201ENSMUST00000157679 100 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Gm16539-201ENSMUST00000160086 327 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Mir7052-201ENSMUST00000184821 65 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Gm28849-201ENSMUST00000188127 174 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Gm38050-201ENSMUST00000191904 238 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Gm42988-201ENSMUST00000198116 225 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Gm44462-201ENSMUST00000199696 129 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.37□□□□□ -2.35
Trem1Q9JKE2 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.36□□□□□ -2.35
Trem1Q9JKE2 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.36□□□□□ -2.35
Trem1Q9JKE2 Gm14980-201ENSMUST00000121247 736 ntBASIC0.36□□□□□ -2.35
Trem1Q9JKE2 Gm6985-201ENSMUST00000121255 271 ntBASIC0.36□□□□□ -2.35
Trem1Q9JKE2 Gm23605-201ENSMUST00000157255 127 ntBASIC0.36□□□□□ -2.35
Trem1Q9JKE2 Mir3535-201ENSMUST00000197651 147 ntBASIC0.36□□□□□ -2.35
Trem1Q9JKE2 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.36□□□□□ -2.35
Trem1Q9JKE2 Gm13518-201ENSMUST00000120018 233 ntBASIC0.35□□□□□ -2.35
Trem1Q9JKE2 Gm24630-201ENSMUST00000122768 106 ntBASIC0.35□□□□□ -2.35
Trem1Q9JKE2 Gm23474-201ENSMUST00000158884 75 ntBASIC0.35□□□□□ -2.35
Trem1Q9JKE2 Mir7118-201ENSMUST00000197760 61 ntBASIC0.35□□□□□ -2.35
Trem1Q9JKE2 Gm25929-201ENSMUST00000082784 107 ntBASIC0.35□□□□□ -2.35
Trem1Q9JKE2 Gm26082-201ENSMUST00000104070 127 ntBASIC0.34□□□□□ -2.36
Trem1Q9JKE2 Gm23101-201ENSMUST00000157550 137 ntBASIC0.34□□□□□ -2.36
Trem1Q9JKE2 Mir6540-201ENSMUST00000184886 108 ntBASIC0.34□□□□□ -2.36
Trem1Q9JKE2 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Trem1Q9JKE2 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.34□□□□□ -2.36
Trem1Q9JKE2 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.34□□□□□ -2.36
Trem1Q9JKE2 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.34□□□□□ -2.36
Trem1Q9JKE2 Gm26326-201ENSMUST00000083070 129 ntBASIC0.34□□□□□ -2.36
Trem1Q9JKE2 Gm42606-201ENSMUST00000114209 239 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm22482-201ENSMUST00000122563 359 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm14298-201ENSMUST00000139032 237 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm16356-201ENSMUST00000143300 169 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm25393-201ENSMUST00000157336 285 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm23584-201ENSMUST00000157655 129 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm25901-201ENSMUST00000158494 130 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm23793-201ENSMUST00000179396 117 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm37338-201ENSMUST00000191986 127 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm42622-201ENSMUST00000197229 355 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm45544-201ENSMUST00000211130 88 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm25138-201ENSMUST00000083248 136 ntBASIC0.33□□□□□ -2.36
Trem1Q9JKE2 Gm12647-201ENSMUST00000118977 265 ntBASIC0.32□□□□□ -2.36
Trem1Q9JKE2 Gm25970-201ENSMUST00000157165 86 ntBASIC0.32□□□□□ -2.36
Trem1Q9JKE2 Gm24345-201ENSMUST00000158706 124 ntBASIC0.32□□□□□ -2.36
Trem1Q9JKE2 Gm7654-201ENSMUST00000186738 683 ntBASIC0.32□□□□□ -2.36
Trem1Q9JKE2 Gm44149-201ENSMUST00000204256 226 ntBASIC0.32□□□□□ -2.36
Trem1Q9JKE2 Gm44057-201ENSMUST00000204547 96 ntBASIC0.32□□□□□ -2.36
Trem1Q9JKE2 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Snord89-201ENSMUST00000104516 110 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Gm23672-201ENSMUST00000157471 107 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Gm25982-201ENSMUST00000157920 101 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Gm26401-201ENSMUST00000158502 76 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Gm28489-201ENSMUST00000186655 316 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Gm28669-201ENSMUST00000188400 100 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Gm44387-201ENSMUST00000196298 145 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Gm44052-201ENSMUST00000203382 396 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Gm23969-201ENSMUST00000083324 74 ntBASIC0.31□□□□□ -2.36
Trem1Q9JKE2 Gm25538-201ENSMUST00000101943 107 ntBASIC0.3□□□□□ -2.36
Trem1Q9JKE2 Gm22469-201ENSMUST00000104118 133 ntBASIC0.3□□□□□ -2.36
Trem1Q9JKE2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.3□□□□□ -2.36
Trem1Q9JKE2 Mir1933-201ENSMUST00000158930 88 ntBASIC0.3□□□□□ -2.36
Trem1Q9JKE2 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.3□□□□□ -2.36
Trem1Q9JKE2 Gm19572-201ENSMUST00000214326 338 ntBASIC0.3□□□□□ -2.36
Trem1Q9JKE2 Gm25814-201ENSMUST00000082754 107 ntBASIC0.3□□□□□ -2.36
Trem1Q9JKE2 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm22786-201ENSMUST00000104086 122 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm15002-201ENSMUST00000118406 452 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm14884-201ENSMUST00000120456 196 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm24476-201ENSMUST00000157437 131 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm22983-201ENSMUST00000158308 104 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm23262-201ENSMUST00000158323 168 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm24323-201ENSMUST00000175342 77 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm22114-201ENSMUST00000177756 107 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm3702-201ENSMUST00000211754 346 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm30155-201ENSMUST00000223458 339 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm23404-201ENSMUST00000082543 97 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Mir30a-201ENSMUST00000083471 71 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm26111-201ENSMUST00000083969 106 ntBASIC0.29□□□□□ -2.36
Trem1Q9JKE2 Gm11834-201ENSMUST00000122257 585 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Gm23536-201ENSMUST00000157541 134 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Gm25558-201ENSMUST00000158083 106 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms