Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm24818-201ENSMUST00000175093 161 ntBASIC-0.23□□□□□ -2.45
Trem3Q9JKE1 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC-0.23□□□□□ -2.45
Trem3Q9JKE1 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.23□□□□□ -2.45
Trem3Q9JKE1 Mir344-201ENSMUST00000083634 95 ntBASIC-0.23□□□□□ -2.45
Trem3Q9JKE1 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 Gm43884-201ENSMUST00000204251 559 ntBASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 Gm25204-201ENSMUST00000082843 106 ntBASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Trem3Q9JKE1 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm13560-201ENSMUST00000121865 329 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm24440-201ENSMUST00000157236 63 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm23232-201ENSMUST00000157300 105 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm24512-201ENSMUST00000174963 65 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm18296-201ENSMUST00000192475 783 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm44473-201ENSMUST00000204039 152 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm43944-201ENSMUST00000205220 120 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 AC154994.1-201ENSMUST00000217395 302 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm23039-201ENSMUST00000083870 161 ntBASIC-0.25□□□□□ -2.45
Trem3Q9JKE1 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Mir670-201ENSMUST00000102380 100 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Gm24379-201ENSMUST00000122695 86 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Gm25044-201ENSMUST00000158603 104 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Gm26073-201ENSMUST00000179906 127 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Gm45119-201ENSMUST00000207612 199 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Mir451a-201ENSMUST00000093557 72 ntBASIC-0.26□□□□□ -2.45
Trem3Q9JKE1 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-0.27□□□□□ -2.45
Trem3Q9JKE1 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-0.27□□□□□ -2.45
Trem3Q9JKE1 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.27□□□□□ -2.45
Trem3Q9JKE1 Gm22215-201ENSMUST00000157558 96 ntBASIC-0.27□□□□□ -2.45
Trem3Q9JKE1 Gm23182-201ENSMUST00000158688 135 ntBASIC-0.27□□□□□ -2.45
Trem3Q9JKE1 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.27□□□□□ -2.45
Trem3Q9JKE1 Gm20462-201ENSMUST00000172623 408 ntBASIC-0.27□□□□□ -2.45
Trem3Q9JKE1 Gm27540-201ENSMUST00000184950 187 ntBASIC-0.27□□□□□ -2.45
Trem3Q9JKE1 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.27□□□□□ -2.45
Trem3Q9JKE1 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.28□□□□□ -2.45
Trem3Q9JKE1 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-0.28□□□□□ -2.45
Trem3Q9JKE1 Gm44352-201ENSMUST00000196358 110 ntBASIC-0.28□□□□□ -2.45
Trem3Q9JKE1 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC-0.28□□□□□ -2.45
Trem3Q9JKE1 Snord85-201ENSMUST00000083262 73 ntBASIC-0.28□□□□□ -2.45
Trem3Q9JKE1 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.28□□□□□ -2.45
Trem3Q9JKE1 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
Trem3Q9JKE1 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.29□□□□□ -2.46
Trem3Q9JKE1 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.29□□□□□ -2.46
Trem3Q9JKE1 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.29□□□□□ -2.46
Trem3Q9JKE1 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.29□□□□□ -2.46
Trem3Q9JKE1 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 Gm22435-201ENSMUST00000158552 128 ntBASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 AC126554.1-201ENSMUST00000222161 271 ntBASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 Gm23448-201ENSMUST00000083151 104 ntBASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 Gm26164-201ENSMUST00000083793 104 ntBASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 n-R5s183-201ENSMUST00000083939 115 ntBASIC-0.3□□□□□ -2.46
Trem3Q9JKE1 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Gm25930-201ENSMUST00000082785 107 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.31□□□□□ -2.46
Trem3Q9JKE1 Mir547-201ENSMUST00000102051 78 ntBASIC-0.32□□□□□ -2.46
Trem3Q9JKE1 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.32□□□□□ -2.46
Trem3Q9JKE1 Gm23016-201ENSMUST00000158431 62 ntBASIC-0.32□□□□□ -2.46
Trem3Q9JKE1 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.32□□□□□ -2.46
Trem3Q9JKE1 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.32□□□□□ -2.46
Trem3Q9JKE1 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.32□□□□□ -2.46
Trem3Q9JKE1 AC167192.2-201ENSMUST00000224794 198 ntBASIC-0.32□□□□□ -2.46
Trem3Q9JKE1 Gm22248-201ENSMUST00000082482 150 ntBASIC-0.32□□□□□ -2.46
Trem3Q9JKE1 Snora20-201ENSMUST00000082703 128 ntBASIC-0.32□□□□□ -2.46
Trem3Q9JKE1 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.33□□□□□ -2.46
Trem3Q9JKE1 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
Trem3Q9JKE1 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.33□□□□□ -2.46
Trem3Q9JKE1 Gm23759-201ENSMUST00000158351 268 ntBASIC-0.33□□□□□ -2.46
Trem3Q9JKE1 Gm23194-201ENSMUST00000158813 105 ntBASIC-0.33□□□□□ -2.46
Trem3Q9JKE1 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-0.33□□□□□ -2.46
Trem3Q9JKE1 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.33□□□□□ -2.46
Trem3Q9JKE1 Mir191-201ENSMUST00000196210 74 ntBASIC-0.33□□□□□ -2.46
Trem3Q9JKE1 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.33□□□□□ -2.46
Trem3Q9JKE1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.33□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms