Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm44352-201ENSMUST00000196358 110 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Mir101a-201ENSMUST00000083517 83 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Mir324-201ENSMUST00000083600 89 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Mir200b-201ENSMUST00000083615 70 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Gm13518-201ENSMUST00000120018 233 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm22598-201ENSMUST00000157600 127 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm26484-201ENSMUST00000158018 106 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm23113-201ENSMUST00000158477 99 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm23474-201ENSMUST00000158884 75 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm25949-201ENSMUST00000175333 114 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Mir3079-201ENSMUST00000175428 90 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Mir6985-201ENSMUST00000184641 61 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm6105-201ENSMUST00000200580 624 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm22248-201ENSMUST00000082482 150 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm22809-201ENSMUST00000082743 156 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm25929-201ENSMUST00000082784 107 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm25855-201ENSMUST00000082787 72 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Mir10b-201ENSMUST00000083566 68 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Mir344-201ENSMUST00000083634 95 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm24258-201ENSMUST00000083739 133 ntBASIC0.41□□□□□ -2.34
Lima1Q9ERG0 Gm13560-201ENSMUST00000121865 329 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Gm23672-201ENSMUST00000157471 107 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Lima1Q9ERG0 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Gm28256-201ENSMUST00000188953 139 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Gm28559-201ENSMUST00000190532 139 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Gm44458-201ENSMUST00000196594 143 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Gm42988-201ENSMUST00000198116 225 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Gm42506-201ENSMUST00000202009 150 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.4□□□□□ -2.35
Lima1Q9ERG0 Gm42606-201ENSMUST00000114209 239 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 Gm25827-201ENSMUST00000157089 107 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 Gm25970-201ENSMUST00000157165 86 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 Gm24847-201ENSMUST00000158032 108 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 Gm22200-201ENSMUST00000158614 67 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Lima1Q9ERG0 Gm28489-201ENSMUST00000186655 316 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 Gm43624-201ENSMUST00000197368 180 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 Gm44948-201ENSMUST00000209050 149 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.39□□□□□ -2.35
Lima1Q9ERG0 Gm13577-201ENSMUST00000121365 205 ntBASIC0.38□□□□□ -2.35
Lima1Q9ERG0 Gm25968-201ENSMUST00000157167 100 ntBASIC0.38□□□□□ -2.35
Lima1Q9ERG0 Mir1931-201ENSMUST00000158589 119 ntBASIC0.38□□□□□ -2.35
Lima1Q9ERG0 Gm23008-201ENSMUST00000158946 80 ntBASIC0.38□□□□□ -2.35
Lima1Q9ERG0 Gm7654-201ENSMUST00000186738 683 ntBASIC0.38□□□□□ -2.35
Lima1Q9ERG0 Gm28330-201ENSMUST00000190353 171 ntBASIC0.38□□□□□ -2.35
Lima1Q9ERG0 Gm42622-201ENSMUST00000197229 355 ntBASIC0.38□□□□□ -2.35
Lima1Q9ERG0 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Lima1Q9ERG0 Gm24342-201ENSMUST00000103907 104 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 Gm24375-201ENSMUST00000104397 132 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 Gm25982-201ENSMUST00000157920 101 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 Gm25838-201ENSMUST00000158920 120 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 Gm27289-201ENSMUST00000183341 82 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 Mir6389-201ENSMUST00000183661 102 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 Gm44387-201ENSMUST00000196298 145 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 Gm44063-201ENSMUST00000203307 376 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 Gm44149-201ENSMUST00000204256 226 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.37□□□□□ -2.35
Lima1Q9ERG0 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.37□□□□□ -2.35
Lima1Q9ERG0 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Lima1Q9ERG0 Gm15002-201ENSMUST00000118406 452 ntBASIC0.36□□□□□ -2.35
Lima1Q9ERG0 Gm13711-201ENSMUST00000119708 453 ntBASIC0.36□□□□□ -2.35
Lima1Q9ERG0 Gm14298-201ENSMUST00000139032 237 ntBASIC0.36□□□□□ -2.35
Lima1Q9ERG0 Gm16356-201ENSMUST00000143300 169 ntBASIC0.36□□□□□ -2.35
Lima1Q9ERG0 Gm26401-201ENSMUST00000158502 76 ntBASIC0.36□□□□□ -2.35
Lima1Q9ERG0 Mir7039-201ENSMUST00000183852 85 ntBASIC0.36□□□□□ -2.35
Lima1Q9ERG0 Rny1-201ENSMUST00000083767 112 ntBASIC0.36□□□□□ -2.35
Lima1Q9ERG0 Gm23039-201ENSMUST00000083870 161 ntBASIC0.36□□□□□ -2.35
Lima1Q9ERG0 Gm23991-201ENSMUST00000117033 93 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm11248-201ENSMUST00000119568 201 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm14884-201ENSMUST00000120456 196 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm23101-201ENSMUST00000157550 137 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm24963-201ENSMUST00000157916 144 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm23665-201ENSMUST00000158054 62 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm23194-201ENSMUST00000158813 105 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm22114-201ENSMUST00000177756 107 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm44462-201ENSMUST00000199696 129 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm44828-201ENSMUST00000203745 106 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm45508-201ENSMUST00000209298 299 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm22365-201ENSMUST00000093750 117 ntBASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Lima1Q9ERG0 Gm24909-201ENSMUST00000157290 280 ntBASIC0.34□□□□□ -2.36
Lima1Q9ERG0 Gm23536-201ENSMUST00000157541 134 ntBASIC0.34□□□□□ -2.36
Lima1Q9ERG0 Gm24498-201ENSMUST00000158445 102 ntBASIC0.34□□□□□ -2.36
Lima1Q9ERG0 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.34□□□□□ -2.36
Lima1Q9ERG0 Mir465d-201ENSMUST00000196314 58 ntBASIC0.34□□□□□ -2.36
Lima1Q9ERG0 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.34□□□□□ -2.36
Lima1Q9ERG0 Gm26111-201ENSMUST00000083969 106 ntBASIC0.34□□□□□ -2.36
Lima1Q9ERG0 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.33□□□□□ -2.36
Lima1Q9ERG0 Gm22759-201ENSMUST00000102276 96 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms