Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm18502-201ENSMUST00000218679 199 ntBASIC2.77□□□□□ -1.97
Upf1Q9EPU0 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Upf1Q9EPU0 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Upf1Q9EPU0 Gm23651-201ENSMUST00000116755 120 ntBASIC2.76□□□□□ -1.97
Upf1Q9EPU0 Gm23080-201ENSMUST00000157846 103 ntBASIC2.76□□□□□ -1.97
Upf1Q9EPU0 Gm23854-201ENSMUST00000158378 108 ntBASIC2.76□□□□□ -1.97
Upf1Q9EPU0 Gm22139-201ENSMUST00000158747 105 ntBASIC2.76□□□□□ -1.97
Upf1Q9EPU0 Gm27527-201ENSMUST00000183903 99 ntBASIC2.76□□□□□ -1.97
Upf1Q9EPU0 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.76□□□□□ -1.97
Upf1Q9EPU0 Gm22297-201ENSMUST00000083312 106 ntBASIC2.76□□□□□ -1.97
Upf1Q9EPU0 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.76□□□□□ -1.97
Upf1Q9EPU0 Gm23320-201ENSMUST00000104462 127 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm22279-201ENSMUST00000157200 93 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm24054-201ENSMUST00000158619 105 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm26157-201ENSMUST00000158974 126 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm25996-201ENSMUST00000175393 117 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm26337-201ENSMUST00000178000 79 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm29658-201ENSMUST00000185404 230 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm29308-201ENSMUST00000188863 315 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm28537-201ENSMUST00000189026 315 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm29631-201ENSMUST00000191065 315 ntBASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Upf1Q9EPU0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Upf1Q9EPU0 Gm25496-201ENSMUST00000104430 120 ntBASIC2.74□□□□□ -1.97
Upf1Q9EPU0 Gm23470-201ENSMUST00000157129 120 ntBASIC2.74□□□□□ -1.97
Upf1Q9EPU0 Gm23390-201ENSMUST00000157393 106 ntBASIC2.74□□□□□ -1.97
Upf1Q9EPU0 Gm22159-201ENSMUST00000158412 130 ntBASIC2.74□□□□□ -1.97
Upf1Q9EPU0 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Upf1Q9EPU0 Gm42960-201ENSMUST00000202160 241 ntBASIC2.74□□□□□ -1.97
Upf1Q9EPU0 Gm18346-201ENSMUST00000216782 325 ntBASIC2.74□□□□□ -1.97
Upf1Q9EPU0 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.74□□□□□ -1.97
Upf1Q9EPU0 Gm25832-201ENSMUST00000104140 130 ntBASIC2.73□□□□□ -1.97
Upf1Q9EPU0 Gm24375-201ENSMUST00000104397 132 ntBASIC2.73□□□□□ -1.97
Upf1Q9EPU0 Gm22373-201ENSMUST00000104584 89 ntBASIC2.73□□□□□ -1.97
Upf1Q9EPU0 Gm22858-201ENSMUST00000174972 76 ntBASIC2.73□□□□□ -1.97
Upf1Q9EPU0 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.73□□□□□ -1.97
Upf1Q9EPU0 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.73□□□□□ -1.97
Upf1Q9EPU0 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Upf1Q9EPU0 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Upf1Q9EPU0 Gm24212-201ENSMUST00000158258 132 ntBASIC2.72□□□□□ -1.97
Upf1Q9EPU0 Mir1931-201ENSMUST00000158589 119 ntBASIC2.72□□□□□ -1.97
Upf1Q9EPU0 Gm24333-201ENSMUST00000175101 84 ntBASIC2.72□□□□□ -1.97
Upf1Q9EPU0 Gm23249-201ENSMUST00000083369 161 ntBASIC2.72□□□□□ -1.97
Upf1Q9EPU0 Gm24261-201ENSMUST00000083744 104 ntBASIC2.72□□□□□ -1.97
Upf1Q9EPU0 Gm10351-201ENSMUST00000087694 125 ntBASIC2.72□□□□□ -1.97
Upf1Q9EPU0 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.72□□□□□ -1.97
Upf1Q9EPU0 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Upf1Q9EPU0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Upf1Q9EPU0 Gm25828-201ENSMUST00000157087 95 ntBASIC2.71□□□□□ -1.98
Upf1Q9EPU0 Gm22381-201ENSMUST00000158186 107 ntBASIC2.71□□□□□ -1.98
Upf1Q9EPU0 Gm22612-201ENSMUST00000158293 101 ntBASIC2.71□□□□□ -1.98
Upf1Q9EPU0 Gm25920-201ENSMUST00000158307 99 ntBASIC2.71□□□□□ -1.98
Upf1Q9EPU0 Gm22768-201ENSMUST00000158366 153 ntBASIC2.71□□□□□ -1.98
Upf1Q9EPU0 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.71□□□□□ -1.98
Upf1Q9EPU0 Gm24038-201ENSMUST00000082872 159 ntBASIC2.71□□□□□ -1.98
Upf1Q9EPU0 Gm24232-201ENSMUST00000104314 132 ntBASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Snord100-201ENSMUST00000116836 74 ntBASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Gm23922-201ENSMUST00000178792 79 ntBASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Gm24657-201ENSMUST00000180085 79 ntBASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Gm22996-201ENSMUST00000180236 79 ntBASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Gm27672-201ENSMUST00000183751 204 ntBASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Gm44921-201ENSMUST00000205290 301 ntBASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Gm26454-201ENSMUST00000082682 107 ntBASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Upf1Q9EPU0 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Upf1Q9EPU0 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Upf1Q9EPU0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm24171-201ENSMUST00000104126 131 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm25321-201ENSMUST00000122558 102 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm25882-201ENSMUST00000157784 85 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm23113-201ENSMUST00000158477 99 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm27934-201ENSMUST00000158795 63 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm23966-201ENSMUST00000179823 107 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm27668-201ENSMUST00000184188 120 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Mir6388-201ENSMUST00000184417 75 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Mir3969-201ENSMUST00000197106 92 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm23140-201ENSMUST00000082487 107 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gm23264-201ENSMUST00000083372 107 ntBASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Upf1Q9EPU0 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm22003-201ENSMUST00000101885 107 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm24010-201ENSMUST00000157731 282 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm22129-201ENSMUST00000179034 107 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm23410-201ENSMUST00000179967 107 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm22756-201ENSMUST00000180118 107 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm44555-201ENSMUST00000209008 148 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm22306-201ENSMUST00000082692 107 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm22505-201ENSMUST00000082956 108 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm22363-201ENSMUST00000083100 108 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm23814-201ENSMUST00000083230 102 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm23095-201ENSMUST00000083446 107 ntBASIC2.68□□□□□ -1.98
Upf1Q9EPU0 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 310.5 ms