Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm14536-201ENSMUST00000118324 138 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm14568-201ENSMUST00000119321 294 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm15027-201ENSMUST00000120922 138 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm24385-201ENSMUST00000122694 350 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm25825-201ENSMUST00000157091 124 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Mir1951-201ENSMUST00000157981 89 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm23996-201ENSMUST00000158062 131 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm26400-201ENSMUST00000175012 85 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm36946-201ENSMUST00000192706 435 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm36956-201ENSMUST00000193830 214 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm43472-201ENSMUST00000200175 154 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm22302-201ENSMUST00000082657 106 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Gm23851-201ENSMUST00000083831 103 ntBASIC0.48□□□□□ -2.33
Ccdc3Q9D6Y1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Mir767-201ENSMUST00000103256 107 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm6272-201ENSMUST00000121256 171 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm14491-201ENSMUST00000121919 199 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm22883-201ENSMUST00000157376 106 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm24498-201ENSMUST00000158445 102 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm7654-201ENSMUST00000186738 683 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm43884-201ENSMUST00000204251 559 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm25929-201ENSMUST00000082784 107 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Mir324-201ENSMUST00000083600 89 ntBASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
Ccdc3Q9D6Y1 Mir1197-201ENSMUST00000117037 120 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm15002-201ENSMUST00000118406 452 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm23672-201ENSMUST00000157471 107 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm23474-201ENSMUST00000158884 75 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm24818-201ENSMUST00000175093 161 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm29014-201ENSMUST00000191422 326 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Mir468-201ENSMUST00000197332 78 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm42988-201ENSMUST00000198116 225 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm44149-201ENSMUST00000204256 226 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm44976-201ENSMUST00000205543 261 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm8219-201ENSMUST00000218309 242 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25855-201ENSMUST00000082787 72 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm22294-201ENSMUST00000083308 104 ntBASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Ccdc3Q9D6Y1 Gm13560-201ENSMUST00000121865 329 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm24595-201ENSMUST00000122501 110 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm22598-201ENSMUST00000157600 127 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm22888-201ENSMUST00000158640 77 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25450-201ENSMUST00000179144 107 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm27317-201ENSMUST00000183533 95 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm28435-201ENSMUST00000185496 108 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm28489-201ENSMUST00000186655 316 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm28927-201ENSMUST00000191528 272 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm43238-201ENSMUST00000196463 359 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm6105-201ENSMUST00000200580 624 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25204-201ENSMUST00000082843 106 ntBASIC0.45□□□□□ -2.34
Ccdc3Q9D6Y1 Gm23492-201ENSMUST00000116837 115 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Gm11835-201ENSMUST00000120635 663 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Gm11834-201ENSMUST00000122257 585 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Gm24629-201ENSMUST00000122762 89 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Gm22522-201ENSMUST00000158271 151 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Gm24678-201ENSMUST00000158756 104 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Gm23793-201ENSMUST00000179396 117 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Gm44063-201ENSMUST00000203307 376 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.44□□□□□ -2.34
Ccdc3Q9D6Y1 Gm24116-201ENSMUST00000103975 107 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25378-201ENSMUST00000104333 129 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Mir654-201ENSMUST00000104787 84 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm42606-201ENSMUST00000114209 239 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm16032-201ENSMUST00000118534 168 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25783-201ENSMUST00000122525 190 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25970-201ENSMUST00000157165 86 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm22796-201ENSMUST00000157234 106 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25375-201ENSMUST00000158157 135 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm23921-201ENSMUST00000175258 107 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm22114-201ENSMUST00000177756 107 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm27365-201ENSMUST00000184041 177 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Mir7093-201ENSMUST00000184195 101 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm44352-201ENSMUST00000196358 110 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.43□□□□□ -2.34
Ccdc3Q9D6Y1 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25827-201ENSMUST00000157089 107 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Gm24192-201ENSMUST00000157978 145 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Gm23262-201ENSMUST00000158323 168 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Gm23113-201ENSMUST00000158477 99 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Mir6389-201ENSMUST00000183661 102 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms