Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm28344-201ENSMUST00000185704 279 ntBASIC1.98□□□□□ -2.09
Ddx56Q9D0R4 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.98□□□□□ -2.09
Ddx56Q9D0R4 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.98□□□□□ -2.09
Ddx56Q9D0R4 Mir490-201ENSMUST00000093567 84 ntBASIC1.98□□□□□ -2.09
Ddx56Q9D0R4 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Gm24984-201ENSMUST00000104454 133 ntBASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Gm25494-201ENSMUST00000158143 100 ntBASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Gm27544-201ENSMUST00000185069 155 ntBASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Gm45508-201ENSMUST00000209298 299 ntBASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Gm45754-201ENSMUST00000212380 279 ntBASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ddx56Q9D0R4 Gm25834-201ENSMUST00000158916 101 ntBASIC1.96□□□□□ -2.1
Ddx56Q9D0R4 Mir7675-201ENSMUST00000184262 58 ntBASIC1.96□□□□□ -2.1
Ddx56Q9D0R4 Gm37586-201ENSMUST00000193654 204 ntBASIC1.96□□□□□ -2.1
Ddx56Q9D0R4 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.96□□□□□ -2.1
Ddx56Q9D0R4 Gm22743-201ENSMUST00000083445 133 ntBASIC1.96□□□□□ -2.1
Ddx56Q9D0R4 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Ddx56Q9D0R4 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Mir653-201ENSMUST00000102402 85 ntBASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Gm25541-201ENSMUST00000116888 126 ntBASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Gm6444-201ENSMUST00000119611 458 ntBASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Gm25390-201ENSMUST00000157341 103 ntBASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Gm25707-201ENSMUST00000175120 96 ntBASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Mir3061-201ENSMUST00000175129 91 ntBASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Gm23419-201ENSMUST00000175523 84 ntBASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Gm9251-201ENSMUST00000197202 628 ntBASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Ddx56Q9D0R4 Gm24677-201ENSMUST00000158755 150 ntBASIC1.94□□□□□ -2.1
Ddx56Q9D0R4 Mir5104-201ENSMUST00000175319 94 ntBASIC1.94□□□□□ -2.1
Ddx56Q9D0R4 Mir7062-201ENSMUST00000185038 66 ntBASIC1.94□□□□□ -2.1
Ddx56Q9D0R4 Gm25895-201ENSMUST00000083714 100 ntBASIC1.94□□□□□ -2.1
Ddx56Q9D0R4 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Gm24729-201ENSMUST00000158225 137 ntBASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Gm25051-201ENSMUST00000158602 249 ntBASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Mir3103-201ENSMUST00000175474 67 ntBASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Gm25750-201ENSMUST00000175483 112 ntBASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Gm28669-201ENSMUST00000188400 100 ntBASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Gm22884-201ENSMUST00000083127 140 ntBASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Mir322-201ENSMUST00000083484 95 ntBASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ddx56Q9D0R4 Mir544-201ENSMUST00000103813 78 ntBASIC1.92□□□□□ -2.1
Ddx56Q9D0R4 Gm24171-201ENSMUST00000104126 131 ntBASIC1.92□□□□□ -2.1
Ddx56Q9D0R4 Gm22099-201ENSMUST00000157925 123 ntBASIC1.92□□□□□ -2.1
Ddx56Q9D0R4 Gm26038-201ENSMUST00000158151 106 ntBASIC1.92□□□□□ -2.1
Ddx56Q9D0R4 Gm24222-201ENSMUST00000158834 93 ntBASIC1.92□□□□□ -2.1
Ddx56Q9D0R4 Gm24656-201ENSMUST00000177548 132 ntBASIC1.92□□□□□ -2.1
Ddx56Q9D0R4 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.92□□□□□ -2.1
Ddx56Q9D0R4 Gm24929-201ENSMUST00000083403 139 ntBASIC1.92□□□□□ -2.1
Ddx56Q9D0R4 Gm24523-201ENSMUST00000083965 132 ntBASIC1.92□□□□□ -2.1
Ddx56Q9D0R4 Mir466p-201ENSMUST00000103925 89 ntBASIC1.91□□□□□ -2.1
Ddx56Q9D0R4 Gm11334-201ENSMUST00000121969 156 ntBASIC1.91□□□□□ -2.1
Ddx56Q9D0R4 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.91□□□□□ -2.1
Ddx56Q9D0R4 Gm22227-201ENSMUST00000157356 259 ntBASIC1.91□□□□□ -2.1
Ddx56Q9D0R4 Gm22666-201ENSMUST00000158717 164 ntBASIC1.91□□□□□ -2.1
Ddx56Q9D0R4 Mir7678-201ENSMUST00000185076 71 ntBASIC1.91□□□□□ -2.1
Ddx56Q9D0R4 Gm6003-201ENSMUST00000187903 463 ntBASIC1.91□□□□□ -2.1
Ddx56Q9D0R4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Ddx56Q9D0R4 Gm25558-201ENSMUST00000158083 106 ntBASIC1.9□□□□□ -2.11
Ddx56Q9D0R4 Gm22264-201ENSMUST00000178200 107 ntBASIC1.9□□□□□ -2.11
Ddx56Q9D0R4 Mir6379-201ENSMUST00000183392 115 ntBASIC1.9□□□□□ -2.11
Ddx56Q9D0R4 Mir7241-201ENSMUST00000184532 64 ntBASIC1.9□□□□□ -2.11
Ddx56Q9D0R4 Gm27959-201ENSMUST00000185172 111 ntBASIC1.9□□□□□ -2.11
Ddx56Q9D0R4 Snord1a-201ENSMUST00000083160 74 ntBASIC1.9□□□□□ -2.11
Ddx56Q9D0R4 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ddx56Q9D0R4 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.9□□□□□ -2.11
Ddx56Q9D0R4 Gm14709-201ENSMUST00000121225 304 ntBASIC1.89□□□□□ -2.11
Ddx56Q9D0R4 Gm22888-201ENSMUST00000158640 77 ntBASIC1.89□□□□□ -2.11
Ddx56Q9D0R4 Gm22403-201ENSMUST00000174919 84 ntBASIC1.89□□□□□ -2.11
Ddx56Q9D0R4 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.89□□□□□ -2.11
Ddx56Q9D0R4 Gm22929-201ENSMUST00000175517 107 ntBASIC1.89□□□□□ -2.11
Ddx56Q9D0R4 Gm25936-201ENSMUST00000179952 114 ntBASIC1.89□□□□□ -2.11
Ddx56Q9D0R4 Gm37778-201ENSMUST00000191732 190 ntBASIC1.89□□□□□ -2.11
Ddx56Q9D0R4 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.89□□□□□ -2.11
Ddx56Q9D0R4 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.88□□□□□ -2.11
Ddx56Q9D0R4 Mir880-201ENSMUST00000104809 78 ntBASIC1.88□□□□□ -2.11
Ddx56Q9D0R4 Gm15069-201ENSMUST00000117792 192 ntBASIC1.88□□□□□ -2.11
Ddx56Q9D0R4 Gm15068-201ENSMUST00000119796 192 ntBASIC1.88□□□□□ -2.11
Ddx56Q9D0R4 Gm23996-201ENSMUST00000158062 131 ntBASIC1.88□□□□□ -2.11
Ddx56Q9D0R4 Mir6997-201ENSMUST00000184313 71 ntBASIC1.88□□□□□ -2.11
Ddx56Q9D0R4 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.88□□□□□ -2.11
Ddx56Q9D0R4 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Ddx56Q9D0R4 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm24276-201ENSMUST00000102181 110 ntBASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm24374-201ENSMUST00000104394 106 ntBASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm24132-201ENSMUST00000104745 91 ntBASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm13246-201ENSMUST00000120994 315 ntBASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm25323-201ENSMUST00000122555 103 ntBASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm24783-201ENSMUST00000157639 100 ntBASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm24634-201ENSMUST00000158672 107 ntBASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm24572-201ENSMUST00000175505 88 ntBASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm22683-201ENSMUST00000082854 137 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 146 ms