Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm22079-201ENSMUST00000157592 106 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm23380-201ENSMUST00000158448 103 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm25771-201ENSMUST00000158565 144 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm22708-201ENSMUST00000158987 103 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm9156-201ENSMUST00000189660 463 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm42960-201ENSMUST00000202160 241 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm45522-201ENSMUST00000210784 166 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm19118-201ENSMUST00000222554 98 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Ssu72Q9CY97 Mir29c-201ENSMUST00000083614 88 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm24171-201ENSMUST00000104126 131 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm26420-201ENSMUST00000104273 103 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm25753-201ENSMUST00000116792 121 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm23168-201ENSMUST00000157156 143 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm23667-201ENSMUST00000157466 120 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm26415-201ENSMUST00000157673 292 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm25884-201ENSMUST00000157782 62 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm22535-201ENSMUST00000158174 119 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Mir1931-201ENSMUST00000158589 119 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm25977-201ENSMUST00000158697 85 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Mir7047-201ENSMUST00000184595 64 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Mir3069-201ENSMUST00000198802 65 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm22055-201ENSMUST00000083388 107 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Mir369-201ENSMUST00000083627 79 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Mir301-201ENSMUST00000083655 86 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Snora33-201ENSMUST00000093556 129 ntBASIC2.54□□□□□ -2
Ssu72Q9CY97 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ssu72Q9CY97 Gm15289-201ENSMUST00000117793 244 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 Gm22792-201ENSMUST00000157225 133 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 Gm22796-201ENSMUST00000157234 106 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 Mir6376-201ENSMUST00000185149 131 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 Gm29658-201ENSMUST00000185404 230 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 Gm43324-201ENSMUST00000197482 289 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 Gm8031-201ENSMUST00000213430 626 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.53□□□□□ -2
Ssu72Q9CY97 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ssu72Q9CY97 Gm24403-201ENSMUST00000104616 130 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Mir293-201ENSMUST00000104841 80 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Gm22141-201ENSMUST00000157403 277 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Gm16976-205ENSMUST00000227324 226 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Gm25199-201ENSMUST00000083095 104 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Gm23249-201ENSMUST00000083369 161 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Gm25628-201ENSMUST00000084002 105 ntBASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ssu72Q9CY97 Gm22004-201ENSMUST00000101884 107 ntBASIC2.51□□□□□ -2.01
Ssu72Q9CY97 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ssu72Q9CY97 Gm24877-201ENSMUST00000158779 116 ntBASIC2.51□□□□□ -2.01
Ssu72Q9CY97 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.51□□□□□ -2.01
Ssu72Q9CY97 Mir6408-201ENSMUST00000183643 91 ntBASIC2.51□□□□□ -2.01
Ssu72Q9CY97 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.51□□□□□ -2.01
Ssu72Q9CY97 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ssu72Q9CY97 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Gm25091-201ENSMUST00000103997 71 ntBASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Gm22031-201ENSMUST00000116945 126 ntBASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Gm14946-201ENSMUST00000119859 296 ntBASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Gm26099-201ENSMUST00000157248 109 ntBASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Gm23854-201ENSMUST00000158378 108 ntBASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Gm8034-201ENSMUST00000178853 132 ntBASIC2.5□□□□□ -2.01
Ssu72Q9CY97 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ssu72Q9CY97 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Gm25878-201ENSMUST00000104327 93 ntBASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Gm43722-201ENSMUST00000196054 124 ntBASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.49□□□□□ -2.01
Ssu72Q9CY97 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.49□□□□□ -2.01
Ssu72Q9CY97 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.49□□□□□ -2.01
Ssu72Q9CY97 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.49□□□□□ -2.01
Ssu72Q9CY97 AF357428-201ENSMUST00000083815 69 ntBASIC2.49□□□□□ -2.01
Ssu72Q9CY97 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ssu72Q9CY97 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Mir547-201ENSMUST00000102051 78 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gm24212-201ENSMUST00000158258 132 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gm24314-201ENSMUST00000158274 123 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gm26406-201ENSMUST00000158503 124 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gm22947-201ENSMUST00000158559 91 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gm26005-201ENSMUST00000158802 134 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gm23548-201ENSMUST00000158963 106 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gm24350-202ENSMUST00000198309 132 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gm44223-201ENSMUST00000204854 114 ntBASIC2.48□□□□□ -2.01
Ssu72Q9CY97 Gm25697-201ENSMUST00000082902 98 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms