Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm27365-201ENSMUST00000184041 177 ntBASIC0.95□□□□□ -2.26
Ccdc43Q9CR29 Gm27997-201ENSMUST00000184942 69 ntBASIC0.95□□□□□ -2.26
Ccdc43Q9CR29 Gm18213-201ENSMUST00000207850 178 ntBASIC0.95□□□□□ -2.26
Ccdc43Q9CR29 Gm18188-201ENSMUST00000219386 478 ntBASIC0.95□□□□□ -2.26
Ccdc43Q9CR29 Gm26495-201ENSMUST00000083152 137 ntBASIC0.95□□□□□ -2.26
Ccdc43Q9CR29 Gm23845-201ENSMUST00000083834 152 ntBASIC0.95□□□□□ -2.26
Ccdc43Q9CR29 Gm22032-201ENSMUST00000116946 116 ntBASIC0.94□□□□□ -2.26
Ccdc43Q9CR29 Gm23328-201ENSMUST00000157418 132 ntBASIC0.94□□□□□ -2.26
Ccdc43Q9CR29 Gm25793-201ENSMUST00000083287 107 ntBASIC0.94□□□□□ -2.26
Ccdc43Q9CR29 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Ccdc43Q9CR29 Gm24375-201ENSMUST00000104397 132 ntBASIC0.93□□□□□ -2.26
Ccdc43Q9CR29 Gm23714-201ENSMUST00000179259 105 ntBASIC0.93□□□□□ -2.26
Ccdc43Q9CR29 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Ccdc43Q9CR29 Gm24624-201ENSMUST00000082617 164 ntBASIC0.93□□□□□ -2.26
Ccdc43Q9CR29 Snord32a-201ENSMUST00000083285 83 ntBASIC0.93□□□□□ -2.26
Ccdc43Q9CR29 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
Ccdc43Q9CR29 Gm22689-201ENSMUST00000102452 110 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Mir654-201ENSMUST00000104787 84 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Gm23982-201ENSMUST00000157141 106 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Gm22321-201ENSMUST00000157152 104 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Gm29512-201ENSMUST00000185544 315 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Gm29490-201ENSMUST00000190923 342 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Gm29665-201ENSMUST00000191457 528 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Gm25820-201ENSMUST00000198589 127 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Gm22421-201ENSMUST00000083058 107 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Mir33-201ENSMUST00000083531 69 ntBASIC0.92□□□□□ -2.26
Ccdc43Q9CR29 Mir695-201ENSMUST00000102261 109 ntBASIC0.91□□□□□ -2.26
Ccdc43Q9CR29 Gm22914-201ENSMUST00000175195 77 ntBASIC0.91□□□□□ -2.26
Ccdc43Q9CR29 Gm25949-201ENSMUST00000175333 114 ntBASIC0.91□□□□□ -2.26
Ccdc43Q9CR29 Mir7052-201ENSMUST00000184821 65 ntBASIC0.91□□□□□ -2.26
Ccdc43Q9CR29 Mir196b-201ENSMUST00000083509 85 ntBASIC0.91□□□□□ -2.26
Ccdc43Q9CR29 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.9□□□□□ -2.27
Ccdc43Q9CR29 Gm24909-201ENSMUST00000157290 280 ntBASIC0.9□□□□□ -2.27
Ccdc43Q9CR29 Mir1954-201ENSMUST00000175595 86 ntBASIC0.9□□□□□ -2.27
Ccdc43Q9CR29 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.9□□□□□ -2.27
Ccdc43Q9CR29 Mir324-201ENSMUST00000083600 89 ntBASIC0.9□□□□□ -2.27
Ccdc43Q9CR29 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 Gm26338-201ENSMUST00000102372 110 ntBASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 Gm24737-201ENSMUST00000158861 100 ntBASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 Mir7663-201ENSMUST00000183950 61 ntBASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 Gm45508-201ENSMUST00000209298 299 ntBASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 Gm25855-201ENSMUST00000082787 72 ntBASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Ccdc43Q9CR29 Gm23640-201ENSMUST00000157860 104 ntBASIC0.88□□□□□ -2.27
Ccdc43Q9CR29 Gm25838-201ENSMUST00000158920 120 ntBASIC0.88□□□□□ -2.27
Ccdc43Q9CR29 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.88□□□□□ -2.27
Ccdc43Q9CR29 Gm38323-201ENSMUST00000192450 210 ntBASIC0.88□□□□□ -2.27
Ccdc43Q9CR29 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.88□□□□□ -2.27
Ccdc43Q9CR29 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.88□□□□□ -2.27
Ccdc43Q9CR29 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.88□□□□□ -2.27
Ccdc43Q9CR29 Gm24275-201ENSMUST00000116780 146 ntBASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 Gm26358-201ENSMUST00000158215 97 ntBASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 Gm22200-201ENSMUST00000158614 67 ntBASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 Gm25715-201ENSMUST00000158627 125 ntBASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 Mir468-201ENSMUST00000197332 78 ntBASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 Gm24316-201ENSMUST00000083041 107 ntBASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Ccdc43Q9CR29 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Gm25544-201ENSMUST00000122676 120 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Mir1961-201ENSMUST00000158643 112 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Mir3968-201ENSMUST00000175355 100 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Gm20923-201ENSMUST00000190009 319 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Gm21088-201ENSMUST00000190875 316 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Gm37404-201ENSMUST00000195726 359 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Gm44976-201ENSMUST00000205543 261 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 DQ267101-201ENSMUST00000082562 73 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.86□□□□□ -2.27
Ccdc43Q9CR29 Gm27723-201ENSMUST00000157398 63 ntBASIC0.85□□□□□ -2.27
Ccdc43Q9CR29 Gm20630-201ENSMUST00000177387 551 ntBASIC0.85□□□□□ -2.27
Ccdc43Q9CR29 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.85□□□□□ -2.27
Ccdc43Q9CR29 Gm23377-201ENSMUST00000082943 126 ntBASIC0.85□□□□□ -2.27
Ccdc43Q9CR29 Gm23766-201ENSMUST00000103894 80 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Gm12432-201ENSMUST00000119540 186 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Gm25643-201ENSMUST00000158874 103 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Mir15a-201ENSMUST00000175266 84 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Gm23571-201ENSMUST00000180073 127 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Gm26379-202ENSMUST00000200225 132 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Gm44959-201ENSMUST00000209127 231 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Gm22809-201ENSMUST00000082743 156 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Mir362-201ENSMUST00000093592 65 ntBASIC0.84□□□□□ -2.27
Ccdc43Q9CR29 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
Ccdc43Q9CR29 Gm24000-201ENSMUST00000158063 89 ntBASIC0.83□□□□□ -2.28
Ccdc43Q9CR29 Gm25558-201ENSMUST00000158083 106 ntBASIC0.83□□□□□ -2.28
Ccdc43Q9CR29 Mir5624-201ENSMUST00000176635 61 ntBASIC0.83□□□□□ -2.28
Ccdc43Q9CR29 Gm43406-201ENSMUST00000200356 334 ntBASIC0.83□□□□□ -2.28
Ccdc43Q9CR29 Gm23735-201ENSMUST00000082551 134 ntBASIC0.83□□□□□ -2.28
Ccdc43Q9CR29 Gm24204-201ENSMUST00000082950 107 ntBASIC0.83□□□□□ -2.28
Ccdc43Q9CR29 Gm26301-201ENSMUST00000104813 95 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 Gm13725-201ENSMUST00000122139 207 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 421.9 ms