Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Mir7009-201ENSMUST00000184519 64 ntBASIC0.35□□□□□ -2.35
Use1Q9CQ56 Gm43238-201ENSMUST00000196463 359 ntBASIC0.35□□□□□ -2.35
Use1Q9CQ56 Gm43367-201ENSMUST00000199986 625 ntBASIC0.35□□□□□ -2.35
Use1Q9CQ56 Gm24616-201ENSMUST00000083274 139 ntBASIC0.35□□□□□ -2.35
Use1Q9CQ56 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Use1Q9CQ56 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.34□□□□□ -2.36
Use1Q9CQ56 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.34□□□□□ -2.36
Use1Q9CQ56 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.34□□□□□ -2.36
Use1Q9CQ56 Gm25393-201ENSMUST00000157336 285 ntBASIC0.34□□□□□ -2.36
Use1Q9CQ56 Gm24000-201ENSMUST00000158063 89 ntBASIC0.34□□□□□ -2.36
Use1Q9CQ56 Gm23024-201ENSMUST00000158770 292 ntBASIC0.34□□□□□ -2.36
Use1Q9CQ56 Gm28330-201ENSMUST00000190353 171 ntBASIC0.34□□□□□ -2.36
Use1Q9CQ56 Mir376a-201ENSMUST00000197584 68 ntBASIC0.34□□□□□ -2.36
Use1Q9CQ56 Gm26326-201ENSMUST00000083070 129 ntBASIC0.34□□□□□ -2.36
Use1Q9CQ56 Mir500-201ENSMUST00000093600 92 ntBASIC0.34□□□□□ -2.36
Use1Q9CQ56 Gm22759-201ENSMUST00000102276 96 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Snord89-201ENSMUST00000104516 110 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Gm23584-201ENSMUST00000157655 129 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Gm22555-201ENSMUST00000157801 62 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Gm16539-201ENSMUST00000160086 327 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Gm43624-201ENSMUST00000197368 180 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Gm30155-201ENSMUST00000223458 339 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Gm25138-201ENSMUST00000083248 136 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Gm24258-201ENSMUST00000083739 133 ntBASIC0.33□□□□□ -2.36
Use1Q9CQ56 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Use1Q9CQ56 Gm22786-201ENSMUST00000104086 122 ntBASIC0.32□□□□□ -2.36
Use1Q9CQ56 Gm26303-201ENSMUST00000116845 119 ntBASIC0.32□□□□□ -2.36
Use1Q9CQ56 Gm14884-201ENSMUST00000120456 196 ntBASIC0.32□□□□□ -2.36
Use1Q9CQ56 Gm12785-201ENSMUST00000122052 172 ntBASIC0.32□□□□□ -2.36
Use1Q9CQ56 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.32□□□□□ -2.36
Use1Q9CQ56 Mir465d-201ENSMUST00000196314 58 ntBASIC0.32□□□□□ -2.36
Use1Q9CQ56 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Use1Q9CQ56 Gm14574-201ENSMUST00000120644 279 ntBASIC0.31□□□□□ -2.36
Use1Q9CQ56 Gm24630-201ENSMUST00000122768 106 ntBASIC0.31□□□□□ -2.36
Use1Q9CQ56 Gm23672-201ENSMUST00000157471 107 ntBASIC0.31□□□□□ -2.36
Use1Q9CQ56 Gm7258-201ENSMUST00000179317 300 ntBASIC0.31□□□□□ -2.36
Use1Q9CQ56 Gm43406-201ENSMUST00000200356 334 ntBASIC0.31□□□□□ -2.36
Use1Q9CQ56 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.31□□□□□ -2.36
Use1Q9CQ56 Gm6985-201ENSMUST00000121255 271 ntBASIC0.3□□□□□ -2.36
Use1Q9CQ56 Gm22985-201ENSMUST00000122754 116 ntBASIC0.3□□□□□ -2.36
Use1Q9CQ56 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.3□□□□□ -2.36
Use1Q9CQ56 Gm23101-201ENSMUST00000157550 137 ntBASIC0.3□□□□□ -2.36
Use1Q9CQ56 Gm23853-201ENSMUST00000158375 104 ntBASIC0.3□□□□□ -2.36
Use1Q9CQ56 Gm23474-201ENSMUST00000158884 75 ntBASIC0.3□□□□□ -2.36
Use1Q9CQ56 Gm23340-201ENSMUST00000158955 123 ntBASIC0.3□□□□□ -2.36
Use1Q9CQ56 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Use1Q9CQ56 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.3□□□□□ -2.36
Use1Q9CQ56 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.3□□□□□ -2.36
Use1Q9CQ56 Gm26107-201ENSMUST00000083972 107 ntBASIC0.3□□□□□ -2.36
Use1Q9CQ56 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.3□□□□□ -2.36
Use1Q9CQ56 Gm24504-201ENSMUST00000157679 100 ntBASIC0.29□□□□□ -2.36
Use1Q9CQ56 Gm44052-201ENSMUST00000203382 396 ntBASIC0.29□□□□□ -2.36
Use1Q9CQ56 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Use1Q9CQ56 Gm24476-201ENSMUST00000157437 131 ntBASIC0.28□□□□□ -2.36
Use1Q9CQ56 Gm22706-201ENSMUST00000157907 112 ntBASIC0.28□□□□□ -2.36
Use1Q9CQ56 Gm22983-201ENSMUST00000158308 104 ntBASIC0.28□□□□□ -2.36
Use1Q9CQ56 Gm8219-201ENSMUST00000218309 242 ntBASIC0.28□□□□□ -2.36
Use1Q9CQ56 Gm23969-201ENSMUST00000083324 74 ntBASIC0.28□□□□□ -2.36
Use1Q9CQ56 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Use1Q9CQ56 Gm22469-201ENSMUST00000104118 133 ntBASIC0.27□□□□□ -2.37
Use1Q9CQ56 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Use1Q9CQ56 Gm25827-201ENSMUST00000157089 107 ntBASIC0.27□□□□□ -2.37
Use1Q9CQ56 Gm25558-201ENSMUST00000158083 106 ntBASIC0.27□□□□□ -2.37
Use1Q9CQ56 Gm24345-201ENSMUST00000158706 124 ntBASIC0.27□□□□□ -2.37
Use1Q9CQ56 Gm22801-201ENSMUST00000175624 84 ntBASIC0.27□□□□□ -2.37
Use1Q9CQ56 Gm25929-201ENSMUST00000082784 107 ntBASIC0.27□□□□□ -2.37
Use1Q9CQ56 Gm24527-201ENSMUST00000082920 107 ntBASIC0.27□□□□□ -2.37
Use1Q9CQ56 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.26□□□□□ -2.37
Use1Q9CQ56 Snord71-201ENSMUST00000104361 85 ntBASIC0.26□□□□□ -2.37
Use1Q9CQ56 Gm13518-201ENSMUST00000120018 233 ntBASIC0.26□□□□□ -2.37
Use1Q9CQ56 Gm26073-201ENSMUST00000179906 127 ntBASIC0.26□□□□□ -2.37
Use1Q9CQ56 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Use1Q9CQ56 Gm44828-201ENSMUST00000203745 106 ntBASIC0.26□□□□□ -2.37
Use1Q9CQ56 Gm44211-201ENSMUST00000204867 145 ntBASIC0.26□□□□□ -2.37
Use1Q9CQ56 Gm14298-201ENSMUST00000139032 237 ntBASIC0.25□□□□□ -2.37
Use1Q9CQ56 Gm16356-201ENSMUST00000143300 169 ntBASIC0.25□□□□□ -2.37
Use1Q9CQ56 Mir1933-201ENSMUST00000158930 88 ntBASIC0.25□□□□□ -2.37
Use1Q9CQ56 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
Use1Q9CQ56 Gm28669-201ENSMUST00000188400 100 ntBASIC0.25□□□□□ -2.37
Use1Q9CQ56 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.25□□□□□ -2.37
Use1Q9CQ56 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.25□□□□□ -2.37
Use1Q9CQ56 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm42606-201ENSMUST00000114209 239 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm23536-201ENSMUST00000157541 134 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm23416-201ENSMUST00000175520 95 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm26285-201ENSMUST00000177923 107 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm7654-201ENSMUST00000186738 683 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm38050-201ENSMUST00000191904 238 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm37763-201ENSMUST00000193445 120 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Mir3535-201ENSMUST00000197651 147 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Use1Q9CQ56 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm23622-201ENSMUST00000082460 107 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm22365-201ENSMUST00000093750 117 ntBASIC0.24□□□□□ -2.37
Use1Q9CQ56 Gm12647-201ENSMUST00000118977 265 ntBASIC0.23□□□□□ -2.37
Use1Q9CQ56 Gm44057-201ENSMUST00000204547 96 ntBASIC0.23□□□□□ -2.37
Use1Q9CQ56 Gm45544-201ENSMUST00000211130 88 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms