Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm7209-201ENSMUST00000122339 333 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Gm22416-201ENSMUST00000158590 88 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Gm25119-201ENSMUST00000158815 88 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Gm28647-201ENSMUST00000188416 197 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Gm45456-201ENSMUST00000210841 243 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Mir155-201ENSMUST00000083463 65 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Gm23040-201ENSMUST00000083869 163 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.12□□□□□ -1.91
Trim11Q99PQ2 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Gm23015-201ENSMUST00000104145 128 ntBASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Gm24947-201ENSMUST00000158334 110 ntBASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Gm24681-201ENSMUST00000158760 107 ntBASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Mir7242-201ENSMUST00000183710 79 ntBASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Gm27365-201ENSMUST00000184041 177 ntBASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Gm27786-201ENSMUST00000184337 70 ntBASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Gm28282-201ENSMUST00000186072 186 ntBASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Gm24615-201ENSMUST00000083268 113 ntBASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Trim11Q99PQ2 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm25500-201ENSMUST00000104426 123 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm22488-201ENSMUST00000116811 127 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm24138-201ENSMUST00000157572 114 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm23865-201ENSMUST00000157723 97 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm23223-201ENSMUST00000158119 127 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm24879-201ENSMUST00000158386 143 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm25771-201ENSMUST00000158565 144 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Mir6386-201ENSMUST00000183558 104 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm24350-202ENSMUST00000198309 132 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Gm44024-201ENSMUST00000203008 476 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim11Q99PQ2 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim11Q99PQ2 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Gm25610-201ENSMUST00000104016 129 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Gm24280-201ENSMUST00000104237 134 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Gm26420-201ENSMUST00000104273 103 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Gm15281-201ENSMUST00000125181 351 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Gm26415-201ENSMUST00000157673 292 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Gm22770-201ENSMUST00000158368 67 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Gm25769-201ENSMUST00000158569 127 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Mir3094-201ENSMUST00000175121 64 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Gm44478-201ENSMUST00000204875 114 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Gm23615-201ENSMUST00000082602 65 ntBASIC3.09□□□□□ -1.91
Trim11Q99PQ2 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Trim11Q99PQ2 Gm25878-201ENSMUST00000104327 93 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm22545-201ENSMUST00000104350 132 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm22023-201ENSMUST00000104354 130 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm24376-201ENSMUST00000104399 127 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm22772-201ENSMUST00000104451 121 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm26473-201ENSMUST00000116763 127 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm23601-201ENSMUST00000157259 131 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm22651-201ENSMUST00000157872 94 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm23858-201ENSMUST00000158384 106 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm23113-201ENSMUST00000158477 99 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm25476-201ENSMUST00000175125 185 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm43521-201ENSMUST00000197838 255 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm43107-201ENSMUST00000198729 255 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 AC122327.1-201ENSMUST00000220778 108 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Gm26126-201ENSMUST00000083188 164 ntBASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim11Q99PQ2 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Gm13885-201ENSMUST00000117569 187 ntBASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Gm24598-201ENSMUST00000122510 74 ntBASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Gm25887-201ENSMUST00000157777 84 ntBASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Gm25888-201ENSMUST00000157778 302 ntBASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Gm24082-201ENSMUST00000175175 83 ntBASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Gm24390-201ENSMUST00000179578 62 ntBASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Gm19257-201ENSMUST00000186121 183 ntBASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Mir34c-201ENSMUST00000083653 77 ntBASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Gm24261-201ENSMUST00000083744 104 ntBASIC3.07□□□□□ -1.92
Trim11Q99PQ2 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim11Q99PQ2 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Gm22067-201ENSMUST00000122790 107 ntBASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Gm25280-201ENSMUST00000157269 101 ntBASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Gm22163-201ENSMUST00000158408 135 ntBASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Gm6788-201ENSMUST00000166459 270 ntBASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Gm28358-202ENSMUST00000189292 223 ntBASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Gm37104-201ENSMUST00000193278 196 ntBASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Gm18346-201ENSMUST00000216782 325 ntBASIC3.06□□□□□ -1.92
Trim11Q99PQ2 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Gm24127-201ENSMUST00000104110 130 ntBASIC3.05□□□□□ -1.92
Trim11Q99PQ2 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Gm25224-201ENSMUST00000158195 68 ntBASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Gm27446-201ENSMUST00000183963 89 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms