Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm23182-201ENSMUST00000158688 135 ntBASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm27845-201ENSMUST00000184479 114 ntBASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm20118-201ENSMUST00000187207 162 ntBASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm42533-201ENSMUST00000196247 157 ntBASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm6105-201ENSMUST00000200580 624 ntBASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm29818-201ENSMUST00000218070 165 ntBASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm22704-201ENSMUST00000083027 137 ntBASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Sf3b1Q99NB9 Gm24595-201ENSMUST00000122501 110 ntBASIC0.91□□□□□ -2.26
Sf3b1Q99NB9 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Sf3b1Q99NB9 Gm22080-201ENSMUST00000157591 106 ntBASIC0.91□□□□□ -2.26
Sf3b1Q99NB9 Gm23996-201ENSMUST00000158062 131 ntBASIC0.91□□□□□ -2.26
Sf3b1Q99NB9 Gm23194-201ENSMUST00000158813 105 ntBASIC0.91□□□□□ -2.26
Sf3b1Q99NB9 Gm26159-201ENSMUST00000158968 104 ntBASIC0.91□□□□□ -2.26
Sf3b1Q99NB9 Gm28344-201ENSMUST00000185704 279 ntBASIC0.91□□□□□ -2.26
Sf3b1Q99NB9 Gm11420-201ENSMUST00000120047 402 ntBASIC0.9□□□□□ -2.26
Sf3b1Q99NB9 Gm13560-201ENSMUST00000121865 329 ntBASIC0.9□□□□□ -2.26
Sf3b1Q99NB9 Gm22425-201ENSMUST00000158532 138 ntBASIC0.9□□□□□ -2.26
Sf3b1Q99NB9 Gm24020-201ENSMUST00000180156 108 ntBASIC0.9□□□□□ -2.26
Sf3b1Q99NB9 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
Sf3b1Q99NB9 Gm38274-201ENSMUST00000195689 148 ntBASIC0.9□□□□□ -2.26
Sf3b1Q99NB9 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.9□□□□□ -2.26
Sf3b1Q99NB9 Gm22689-201ENSMUST00000102452 110 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Gm14536-201ENSMUST00000118324 138 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Gm15027-201ENSMUST00000120922 138 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Gm22515-201ENSMUST00000158273 305 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Gm29512-201ENSMUST00000185544 315 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Mir200b-201ENSMUST00000083615 70 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Snord35a-201ENSMUST00000083884 90 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Gm23991-201ENSMUST00000117033 93 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Gm11856-201ENSMUST00000118712 276 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Snora24-201ENSMUST00000174989 130 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Gm27997-201ENSMUST00000184942 69 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.89□□□□□ -2.27
Sf3b1Q99NB9 Gm24431-201ENSMUST00000104073 66 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Gm24501-201ENSMUST00000158452 62 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Gm25901-201ENSMUST00000158494 130 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Gm44396-201ENSMUST00000199843 114 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Gm44921-201ENSMUST00000205290 301 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Gm25793-201ENSMUST00000083287 107 ntBASIC0.88□□□□□ -2.27
Sf3b1Q99NB9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 Gm24271-201ENSMUST00000102327 111 ntBASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 Gm23536-201ENSMUST00000157541 134 ntBASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 Gm24737-201ENSMUST00000158861 100 ntBASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 Gm29665-201ENSMUST00000191457 528 ntBASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 Gm23845-201ENSMUST00000083834 152 ntBASIC0.87□□□□□ -2.27
Sf3b1Q99NB9 Mir759-201ENSMUST00000103254 98 ntBASIC0.86□□□□□ -2.27
Sf3b1Q99NB9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.86□□□□□ -2.27
Sf3b1Q99NB9 Gm11248-201ENSMUST00000119568 201 ntBASIC0.86□□□□□ -2.27
Sf3b1Q99NB9 Gm23101-201ENSMUST00000157550 137 ntBASIC0.86□□□□□ -2.27
Sf3b1Q99NB9 Gm23665-201ENSMUST00000158054 62 ntBASIC0.86□□□□□ -2.27
Sf3b1Q99NB9 Gm22888-201ENSMUST00000158640 77 ntBASIC0.86□□□□□ -2.27
Sf3b1Q99NB9 Gm43505-201ENSMUST00000200579 139 ntBASIC0.86□□□□□ -2.27
Sf3b1Q99NB9 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.86□□□□□ -2.27
Sf3b1Q99NB9 Gm23039-201ENSMUST00000083870 161 ntBASIC0.86□□□□□ -2.27
Sf3b1Q99NB9 Gm24275-201ENSMUST00000116780 146 ntBASIC0.85□□□□□ -2.27
Sf3b1Q99NB9 Gm14906-201ENSMUST00000119265 390 ntBASIC0.85□□□□□ -2.27
Sf3b1Q99NB9 Gm22321-201ENSMUST00000157152 104 ntBASIC0.85□□□□□ -2.27
Sf3b1Q99NB9 Gm23113-201ENSMUST00000158477 99 ntBASIC0.85□□□□□ -2.27
Sf3b1Q99NB9 Mir1931-201ENSMUST00000158589 119 ntBASIC0.85□□□□□ -2.27
Sf3b1Q99NB9 Gm26968-201ENSMUST00000182894 481 ntBASIC0.85□□□□□ -2.27
Sf3b1Q99NB9 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.85□□□□□ -2.27
Sf3b1Q99NB9 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.85□□□□□ -2.27
Sf3b1Q99NB9 Gm26495-201ENSMUST00000083152 137 ntBASIC0.85□□□□□ -2.27
Sf3b1Q99NB9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.84□□□□□ -2.27
Sf3b1Q99NB9 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.84□□□□□ -2.27
Sf3b1Q99NB9 Mir880-201ENSMUST00000104809 78 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 Gm14568-201ENSMUST00000119321 294 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 Gm13711-201ENSMUST00000119708 453 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 Gm23982-201ENSMUST00000157141 106 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 Gm24401-201ENSMUST00000157868 91 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 Gm25166-201ENSMUST00000158909 111 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 Gm24311-201ENSMUST00000082570 104 ntBASIC0.84□□□□□ -2.28
Sf3b1Q99NB9 Gm22421-201ENSMUST00000083058 107 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms