Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm24478-201ENSMUST00000157439 158 ntBASIC2.09□□□□□ -2.07
Pcdha3Q91Y16 Gm26345-201ENSMUST00000157534 120 ntBASIC2.09□□□□□ -2.07
Pcdha3Q91Y16 Gm22664-201ENSMUST00000158719 105 ntBASIC2.09□□□□□ -2.07
Pcdha3Q91Y16 Gm29308-201ENSMUST00000188863 315 ntBASIC2.09□□□□□ -2.07
Pcdha3Q91Y16 Gm28537-201ENSMUST00000189026 315 ntBASIC2.09□□□□□ -2.07
Pcdha3Q91Y16 Gm29631-201ENSMUST00000191065 315 ntBASIC2.09□□□□□ -2.07
Pcdha3Q91Y16 Gm42988-201ENSMUST00000198116 225 ntBASIC2.09□□□□□ -2.07
Pcdha3Q91Y16 Snord118-201ENSMUST00000082965 135 ntBASIC2.09□□□□□ -2.07
Pcdha3Q91Y16 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm22139-201ENSMUST00000158747 105 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm24676-201ENSMUST00000158758 75 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Mir3086-201ENSMUST00000175072 87 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm24167-201ENSMUST00000177733 124 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm24028-201ENSMUST00000178991 124 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm27851-201ENSMUST00000183529 63 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Mir6995-201ENSMUST00000183658 71 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm27443-201ENSMUST00000184660 98 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm44338-201ENSMUST00000198614 110 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Mir322-201ENSMUST00000083484 95 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.08□□□□□ -2.08
Pcdha3Q91Y16 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm22338-201ENSMUST00000157715 129 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm22967-201ENSMUST00000157956 239 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm25371-201ENSMUST00000158162 101 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm24770-201ENSMUST00000158505 92 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm24054-201ENSMUST00000158619 105 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm23966-201ENSMUST00000179823 107 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Mir6901-201ENSMUST00000185062 62 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm9156-201ENSMUST00000189660 463 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm42960-201ENSMUST00000202160 241 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.07□□□□□ -2.08
Pcdha3Q91Y16 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Gm24907-201ENSMUST00000116932 128 ntBASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Gm15281-201ENSMUST00000125181 351 ntBASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Gm22850-201ENSMUST00000157714 82 ntBASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Gm23548-201ENSMUST00000158963 106 ntBASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Gm24333-201ENSMUST00000175101 84 ntBASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Mir7226-201ENSMUST00000184953 60 ntBASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Gm44470-201ENSMUST00000203913 142 ntBASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Gm43865-201ENSMUST00000204721 127 ntBASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Pcdha3Q91Y16 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Pcdha3Q91Y16 Gm16328-201ENSMUST00000126985 196 ntBASIC2.05□□□□□ -2.08
Pcdha3Q91Y16 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.05□□□□□ -2.08
Pcdha3Q91Y16 Gm27979-201ENSMUST00000185126 56 ntBASIC2.05□□□□□ -2.08
Pcdha3Q91Y16 Gm18502-201ENSMUST00000218679 199 ntBASIC2.05□□□□□ -2.08
Pcdha3Q91Y16 Gm26454-201ENSMUST00000082682 107 ntBASIC2.05□□□□□ -2.08
Pcdha3Q91Y16 Mir151-201ENSMUST00000083678 68 ntBASIC2.05□□□□□ -2.08
Pcdha3Q91Y16 Mir293-201ENSMUST00000104841 80 ntBASIC2.04□□□□□ -2.08
Pcdha3Q91Y16 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.04□□□□□ -2.08
Pcdha3Q91Y16 Gm26291-201ENSMUST00000158889 137 ntBASIC2.04□□□□□ -2.08
Pcdha3Q91Y16 Gm27722-201ENSMUST00000183908 76 ntBASIC2.04□□□□□ -2.08
Pcdha3Q91Y16 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.04□□□□□ -2.08
Pcdha3Q91Y16 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.04□□□□□ -2.08
Pcdha3Q91Y16 Gm23239-201ENSMUST00000083006 181 ntBASIC2.04□□□□□ -2.08
Pcdha3Q91Y16 Mir107-201ENSMUST00000083660 87 ntBASIC2.04□□□□□ -2.08
Pcdha3Q91Y16 Snora33-201ENSMUST00000093556 129 ntBASIC2.04□□□□□ -2.08
Pcdha3Q91Y16 Gm22373-201ENSMUST00000104584 89 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm25113-201ENSMUST00000157185 143 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm22381-201ENSMUST00000158186 107 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm22768-201ENSMUST00000158366 153 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm23337-201ENSMUST00000158959 118 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm25994-201ENSMUST00000175392 101 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm26337-201ENSMUST00000178000 79 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Mir6997-201ENSMUST00000184313 71 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm28409-201ENSMUST00000187064 103 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm38364-201ENSMUST00000191814 179 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm44057-201ENSMUST00000204547 96 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm23722-201ENSMUST00000083002 130 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm22297-201ENSMUST00000083312 106 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm24412-201ENSMUST00000083426 109 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Mir429-201ENSMUST00000083493 83 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.03□□□□□ -2.08
Pcdha3Q91Y16 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 Gm24375-201ENSMUST00000104397 132 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 Gm23320-201ENSMUST00000104462 127 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 Gm26049-201ENSMUST00000157313 108 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 Mir1949-201ENSMUST00000157434 141 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 Gm25920-201ENSMUST00000158307 99 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 Gm24634-201ENSMUST00000158672 107 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 Gm26360-201ENSMUST00000158872 103 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 Gm9251-201ENSMUST00000197202 628 ntBASIC2.02□□□□□ -2.09
Pcdha3Q91Y16 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 341.2 ms