Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm24010-201ENSMUST00000157731 282 ntBASIC2.23□□□□□ -2.05
Clrn1Q8K445 Gm24333-201ENSMUST00000175101 84 ntBASIC2.23□□□□□ -2.05
Clrn1Q8K445 Gm23567-201ENSMUST00000178005 107 ntBASIC2.23□□□□□ -2.05
Clrn1Q8K445 Gm28669-201ENSMUST00000188400 100 ntBASIC2.23□□□□□ -2.05
Clrn1Q8K445 Gm44481-201ENSMUST00000197288 84 ntBASIC2.23□□□□□ -2.05
Clrn1Q8K445 Gm44339-201ENSMUST00000200598 84 ntBASIC2.23□□□□□ -2.05
Clrn1Q8K445 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.23□□□□□ -2.05
Clrn1Q8K445 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.23□□□□□ -2.05
Clrn1Q8K445 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Clrn1Q8K445 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm26339-201ENSMUST00000102368 99 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm25558-201ENSMUST00000158083 106 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm22517-201ENSMUST00000158265 136 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm22768-201ENSMUST00000158366 153 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm24358-201ENSMUST00000158424 288 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm23005-201ENSMUST00000158950 136 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm22500-201ENSMUST00000158982 99 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm24816-201ENSMUST00000175311 151 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm44464-201ENSMUST00000198010 138 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm43381-201ENSMUST00000198553 165 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.22□□□□□ -2.05
Clrn1Q8K445 Mir34a-201ENSMUST00000083559 102 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.22□□□□□ -2.05
Clrn1Q8K445 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Clrn1Q8K445 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.21□□□□□ -2.05
Clrn1Q8K445 Gm24171-201ENSMUST00000104126 131 ntBASIC2.21□□□□□ -2.06
Clrn1Q8K445 Gm28900-201ENSMUST00000185232 156 ntBASIC2.21□□□□□ -2.06
Clrn1Q8K445 Gm29604-201ENSMUST00000187176 163 ntBASIC2.21□□□□□ -2.06
Clrn1Q8K445 Gm43626-201ENSMUST00000198575 162 ntBASIC2.21□□□□□ -2.06
Clrn1Q8K445 Gm43898-201ENSMUST00000204456 424 ntBASIC2.21□□□□□ -2.06
Clrn1Q8K445 Gm25588-201ENSMUST00000082501 140 ntBASIC2.21□□□□□ -2.06
Clrn1Q8K445 Mir429-201ENSMUST00000083493 83 ntBASIC2.21□□□□□ -2.06
Clrn1Q8K445 Snora33-201ENSMUST00000093556 129 ntBASIC2.21□□□□□ -2.06
Clrn1Q8K445 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.2□□□□□ -2.06
Clrn1Q8K445 Trbv7-201ENSMUST00000193339 402 ntBASIC2.2□□□□□ -2.06
Clrn1Q8K445 Gm23370-201ENSMUST00000199545 130 ntBASIC2.2□□□□□ -2.06
Clrn1Q8K445 Gm19855-201ENSMUST00000210145 249 ntBASIC2.2□□□□□ -2.06
Clrn1Q8K445 Gm24280-201ENSMUST00000104237 134 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm23803-201ENSMUST00000104610 132 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm16186-201ENSMUST00000120132 216 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm23898-201ENSMUST00000158111 103 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm24668-201ENSMUST00000158935 104 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm23963-201ENSMUST00000179603 77 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm38298-201ENSMUST00000193578 118 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm44325-201ENSMUST00000196757 77 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm25697-201ENSMUST00000082902 98 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm25628-201ENSMUST00000084002 105 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.19□□□□□ -2.06
Clrn1Q8K445 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.19□□□□□ -2.06
Clrn1Q8K445 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Clrn1Q8K445 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Clrn1Q8K445 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm22486-201ENSMUST00000116815 137 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm24482-201ENSMUST00000117005 93 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm14502-201ENSMUST00000118154 113 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm15067-201ENSMUST00000119534 156 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm23889-201ENSMUST00000122689 104 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm15281-201ENSMUST00000125181 351 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm24851-201ENSMUST00000158028 103 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm23548-201ENSMUST00000158963 106 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Mir7118-201ENSMUST00000197760 61 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm44555-201ENSMUST00000209008 148 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm45791-201ENSMUST00000212908 352 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm25788-201ENSMUST00000082721 131 ntBASIC2.18□□□□□ -2.06
Clrn1Q8K445 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Clrn1Q8K445 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Clrn1Q8K445 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Clrn1Q8K445 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.17□□□□□ -2.06
Clrn1Q8K445 Mir1931-201ENSMUST00000158589 119 ntBASIC2.17□□□□□ -2.06
Clrn1Q8K445 Gm23504-201ENSMUST00000158988 95 ntBASIC2.17□□□□□ -2.06
Clrn1Q8K445 Mir3075-201ENSMUST00000175340 85 ntBASIC2.17□□□□□ -2.06
Clrn1Q8K445 Gm27369-201ENSMUST00000185182 71 ntBASIC2.17□□□□□ -2.06
Clrn1Q8K445 Gm43722-201ENSMUST00000196054 124 ntBASIC2.17□□□□□ -2.06
Clrn1Q8K445 Gm3724-201ENSMUST00000197957 349 ntBASIC2.17□□□□□ -2.06
Clrn1Q8K445 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.17□□□□□ -2.06
Clrn1Q8K445 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.17□□□□□ -2.06
Clrn1Q8K445 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Clrn1Q8K445 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Clrn1Q8K445 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 Gm14709-201ENSMUST00000121225 304 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 Gm14671-201ENSMUST00000121790 262 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 Gm26084-201ENSMUST00000157903 104 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 Gm24769-201ENSMUST00000158506 129 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 Gm22011-201ENSMUST00000158790 123 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 Gm27792-201ENSMUST00000184031 115 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 Gm24261-201ENSMUST00000083744 104 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 Gm25409-201ENSMUST00000083764 131 ntBASIC2.16□□□□□ -2.06
Clrn1Q8K445 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Clrn1Q8K445 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Clrn1Q8K445 Gm13588-201ENSMUST00000120026 135 ntBASIC2.15□□□□□ -2.07
Clrn1Q8K445 Gm26091-201ENSMUST00000122704 82 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 164.8 ms