Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm22911-201ENSMUST00000177920 107 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Gm27285-201ENSMUST00000183875 127 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Gm18188-201ENSMUST00000219386 478 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 Gm16032-201ENSMUST00000118534 168 ntBASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 Gm6025-201ENSMUST00000121517 201 ntBASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 Gm27699-201ENSMUST00000183553 180 ntBASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 Mir721-201ENSMUST00000200230 88 ntBASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 Mir302d-201ENSMUST00000083513 66 ntBASIC1.49□□□□□ -2.17
Ccdc28bQ8CEG5 Gm22082-201ENSMUST00000157587 161 ntBASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 Gm24015-201ENSMUST00000157725 232 ntBASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 Gm24668-201ENSMUST00000158935 104 ntBASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 Mir7679-201ENSMUST00000183379 63 ntBASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 Gm36189-201ENSMUST00000204113 523 ntBASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 Gm25357-201ENSMUST00000082745 72 ntBASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 Gm24929-201ENSMUST00000083403 139 ntBASIC1.48□□□□□ -2.17
Ccdc28bQ8CEG5 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Snord89-201ENSMUST00000104516 110 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm14674-201ENSMUST00000117816 342 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm15115-201ENSMUST00000121145 264 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm25914-201ENSMUST00000157618 153 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm26024-201ENSMUST00000158657 322 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm20477-201ENSMUST00000174028 280 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Mir7062-201ENSMUST00000185038 66 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm44322-201ENSMUST00000196830 115 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm44052-201ENSMUST00000203382 396 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm46993-201ENSMUST00000220708 259 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.47□□□□□ -2.17
Ccdc28bQ8CEG5 Gm24276-201ENSMUST00000102181 110 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm26339-201ENSMUST00000102368 99 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm24068-201ENSMUST00000104513 132 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm26342-201ENSMUST00000104557 129 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm24683-201ENSMUST00000104840 88 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm14937-201ENSMUST00000119709 208 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm28912-201ENSMUST00000189001 234 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm21064-202ENSMUST00000190583 278 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm37624-201ENSMUST00000193751 219 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm19855-201ENSMUST00000210145 249 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Gm24038-201ENSMUST00000082872 159 ntBASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Ccdc28bQ8CEG5 Mir223-201ENSMUST00000102112 110 ntBASIC1.45□□□□□ -2.18
Ccdc28bQ8CEG5 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.45□□□□□ -2.18
Ccdc28bQ8CEG5 Gm25035-201ENSMUST00000175414 77 ntBASIC1.45□□□□□ -2.18
Ccdc28bQ8CEG5 Mir7683-201ENSMUST00000183842 61 ntBASIC1.45□□□□□ -2.18
Ccdc28bQ8CEG5 Gm23370-201ENSMUST00000199545 130 ntBASIC1.45□□□□□ -2.18
Ccdc28bQ8CEG5 Gm22686-201ENSMUST00000082847 100 ntBASIC1.45□□□□□ -2.18
Ccdc28bQ8CEG5 Gm24805-201ENSMUST00000082931 104 ntBASIC1.45□□□□□ -2.18
Ccdc28bQ8CEG5 Gm23100-201ENSMUST00000083455 141 ntBASIC1.45□□□□□ -2.18
Ccdc28bQ8CEG5 Gm23655-201ENSMUST00000122627 105 ntBASIC1.44□□□□□ -2.18
Ccdc28bQ8CEG5 Gm22337-201ENSMUST00000157721 132 ntBASIC1.44□□□□□ -2.18
Ccdc28bQ8CEG5 Gm22862-201ENSMUST00000178593 121 ntBASIC1.44□□□□□ -2.18
Ccdc28bQ8CEG5 Mir6917-201ENSMUST00000184111 61 ntBASIC1.44□□□□□ -2.18
Ccdc28bQ8CEG5 Gm44483-201ENSMUST00000197203 97 ntBASIC1.44□□□□□ -2.18
Ccdc28bQ8CEG5 Snord80-202ENSMUST00000199023 77 ntBASIC1.44□□□□□ -2.18
Ccdc28bQ8CEG5 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm23109-201ENSMUST00000116867 126 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm14536-201ENSMUST00000118324 138 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm15027-201ENSMUST00000120922 138 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm25642-201ENSMUST00000175137 66 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm27928-201ENSMUST00000183747 256 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm42719-201ENSMUST00000197393 355 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm44057-201ENSMUST00000204547 96 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Mir322-201ENSMUST00000083484 95 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.43□□□□□ -2.18
Ccdc28bQ8CEG5 Gm25541-201ENSMUST00000116888 126 ntBASIC1.42□□□□□ -2.18
Ccdc28bQ8CEG5 Gm23656-201ENSMUST00000122626 112 ntBASIC1.42□□□□□ -2.18
Ccdc28bQ8CEG5 Gm25985-201ENSMUST00000122677 107 ntBASIC1.42□□□□□ -2.18
Ccdc28bQ8CEG5 Gm22559-201ENSMUST00000157329 134 ntBASIC1.42□□□□□ -2.18
Ccdc28bQ8CEG5 Mir1931-201ENSMUST00000158589 119 ntBASIC1.42□□□□□ -2.18
Ccdc28bQ8CEG5 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.42□□□□□ -2.18
Ccdc28bQ8CEG5 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm24375-201ENSMUST00000104397 132 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm25884-201ENSMUST00000157782 62 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm23209-201ENSMUST00000158667 110 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm22476-201ENSMUST00000158902 100 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm23963-201ENSMUST00000179603 77 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Mir6352-201ENSMUST00000184495 116 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm18433-201ENSMUST00000192747 197 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm44326-201ENSMUST00000198226 101 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms