Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.19□□□□□ -2.06
Ccdc87Q8CDL9 Gm23656-201ENSMUST00000122626 112 ntBASIC2.19□□□□□ -2.06
Ccdc87Q8CDL9 Gm25223-201ENSMUST00000158200 110 ntBASIC2.19□□□□□ -2.06
Ccdc87Q8CDL9 Gm22159-201ENSMUST00000158412 130 ntBASIC2.19□□□□□ -2.06
Ccdc87Q8CDL9 Snord87-201ENSMUST00000175437 87 ntBASIC2.19□□□□□ -2.06
Ccdc87Q8CDL9 Gm28344-201ENSMUST00000185704 279 ntBASIC2.19□□□□□ -2.06
Ccdc87Q8CDL9 Gm36189-201ENSMUST00000204113 523 ntBASIC2.19□□□□□ -2.06
Ccdc87Q8CDL9 Gm18188-201ENSMUST00000219386 478 ntBASIC2.19□□□□□ -2.06
Ccdc87Q8CDL9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ccdc87Q8CDL9 Gm26077-201ENSMUST00000104064 123 ntBASIC2.18□□□□□ -2.06
Ccdc87Q8CDL9 Gm24106-201ENSMUST00000175498 127 ntBASIC2.18□□□□□ -2.06
Ccdc87Q8CDL9 Mir7683-201ENSMUST00000183842 61 ntBASIC2.18□□□□□ -2.06
Ccdc87Q8CDL9 Mir7225-201ENSMUST00000184178 54 ntBASIC2.18□□□□□ -2.06
Ccdc87Q8CDL9 Mir7016-201ENSMUST00000184308 72 ntBASIC2.18□□□□□ -2.06
Ccdc87Q8CDL9 Gm43427-201ENSMUST00000198188 331 ntBASIC2.18□□□□□ -2.06
Ccdc87Q8CDL9 Snora3-201ENSMUST00000083082 132 ntBASIC2.18□□□□□ -2.06
Ccdc87Q8CDL9 Snord89-201ENSMUST00000104516 110 ntBASIC2.17□□□□□ -2.06
Ccdc87Q8CDL9 Gm24379-201ENSMUST00000122695 86 ntBASIC2.17□□□□□ -2.06
Ccdc87Q8CDL9 Gm22586-201ENSMUST00000157507 122 ntBASIC2.17□□□□□ -2.06
Ccdc87Q8CDL9 Gm23342-201ENSMUST00000158958 115 ntBASIC2.17□□□□□ -2.06
Ccdc87Q8CDL9 Gm23813-201ENSMUST00000175153 77 ntBASIC2.17□□□□□ -2.06
Ccdc87Q8CDL9 Gm27285-201ENSMUST00000183875 127 ntBASIC2.17□□□□□ -2.06
Ccdc87Q8CDL9 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ccdc87Q8CDL9 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.17□□□□□ -2.06
Ccdc87Q8CDL9 Gm25094-201ENSMUST00000103992 131 ntBASIC2.16□□□□□ -2.06
Ccdc87Q8CDL9 Gm25915-201ENSMUST00000104265 126 ntBASIC2.16□□□□□ -2.06
Ccdc87Q8CDL9 Gm6025-201ENSMUST00000121517 201 ntBASIC2.16□□□□□ -2.06
Ccdc87Q8CDL9 Gm24237-201ENSMUST00000157790 132 ntBASIC2.16□□□□□ -2.06
Ccdc87Q8CDL9 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ccdc87Q8CDL9 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.16□□□□□ -2.06
Ccdc87Q8CDL9 Mir3087-201ENSMUST00000199405 56 ntBASIC2.16□□□□□ -2.06
Ccdc87Q8CDL9 Gm44052-201ENSMUST00000203382 396 ntBASIC2.16□□□□□ -2.06
Ccdc87Q8CDL9 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.16□□□□□ -2.06
Ccdc87Q8CDL9 Gm12941-201ENSMUST00000117934 220 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm24010-201ENSMUST00000157731 282 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm25884-201ENSMUST00000157782 62 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm25267-201ENSMUST00000158522 63 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm24131-201ENSMUST00000158539 107 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm23181-201ENSMUST00000158685 110 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm23966-201ENSMUST00000179823 107 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm42719-201ENSMUST00000197393 355 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm25402-201ENSMUST00000082966 131 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Mir222-201ENSMUST00000083537 79 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm25895-201ENSMUST00000083714 100 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Gm24261-201ENSMUST00000083744 104 ntBASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Ccdc87Q8CDL9 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Gm25071-201ENSMUST00000175232 70 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Gm25069-201ENSMUST00000175238 86 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Gm23714-201ENSMUST00000179259 105 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Gm6003-201ENSMUST00000187903 463 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Gm28537-201ENSMUST00000189026 315 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Gm29631-201ENSMUST00000191065 315 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Gm44490-201ENSMUST00000198566 127 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc87Q8CDL9 Gm23655-201ENSMUST00000122627 105 ntBASIC2.13□□□□□ -2.07
Ccdc87Q8CDL9 Gm24015-201ENSMUST00000157725 232 ntBASIC2.13□□□□□ -2.07
Ccdc87Q8CDL9 Gm25599-201ENSMUST00000157816 103 ntBASIC2.13□□□□□ -2.07
Ccdc87Q8CDL9 Gm21885-201ENSMUST00000178891 327 ntBASIC2.13□□□□□ -2.07
Ccdc87Q8CDL9 Gm5900-201ENSMUST00000179862 375 ntBASIC2.13□□□□□ -2.07
Ccdc87Q8CDL9 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.13□□□□□ -2.07
Ccdc87Q8CDL9 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.13□□□□□ -2.07
Ccdc87Q8CDL9 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Ccdc87Q8CDL9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Gm26339-201ENSMUST00000102368 99 ntBASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Gm24770-201ENSMUST00000158505 92 ntBASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Mir6419-201ENSMUST00000184784 113 ntBASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Gm37579-201ENSMUST00000194291 142 ntBASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Mir7217-201ENSMUST00000200304 62 ntBASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Gm5002-201ENSMUST00000207145 223 ntBASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Gm46993-201ENSMUST00000220708 259 ntBASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Ccdc87Q8CDL9 Gm6444-201ENSMUST00000119611 458 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Gm23172-201ENSMUST00000157160 124 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Mir7039-201ENSMUST00000183852 85 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Gm26454-201ENSMUST00000082682 107 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Mir30d-201ENSMUST00000083503 82 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Mir302d-201ENSMUST00000083513 66 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.11□□□□□ -2.07
Ccdc87Q8CDL9 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.1□□□□□ -2.07
Ccdc87Q8CDL9 Gm14536-201ENSMUST00000118324 138 ntBASIC2.1□□□□□ -2.07
Ccdc87Q8CDL9 Gm15027-201ENSMUST00000120922 138 ntBASIC2.1□□□□□ -2.07
Ccdc87Q8CDL9 Gm26864-201ENSMUST00000181346 156 ntBASIC2.1□□□□□ -2.07
Ccdc87Q8CDL9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc87Q8CDL9 Gm45654-201ENSMUST00000210980 123 ntBASIC2.1□□□□□ -2.07
Ccdc87Q8CDL9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc87Q8CDL9 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc87Q8CDL9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 157.4 ms