Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 DQ267100-201ENSMUST00000122600 72 ntBASIC2.38□□□□□ -2.03
Ube3dQ8BX13 Gm16584-201ENSMUST00000159267 189 ntBASIC2.38□□□□□ -2.03
Ube3dQ8BX13 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.38□□□□□ -2.03
Ube3dQ8BX13 Gm23128-202ENSMUST00000196578 133 ntBASIC2.38□□□□□ -2.03
Ube3dQ8BX13 Gm43602-201ENSMUST00000196772 300 ntBASIC2.38□□□□□ -2.03
Ube3dQ8BX13 Gm44555-201ENSMUST00000209008 148 ntBASIC2.38□□□□□ -2.03
Ube3dQ8BX13 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.38□□□□□ -2.03
Ube3dQ8BX13 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.38□□□□□ -2.03
Ube3dQ8BX13 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.38□□□□□ -2.03
Ube3dQ8BX13 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ube3dQ8BX13 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Mir344c-201ENSMUST00000103919 92 ntBASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Gm16186-201ENSMUST00000120132 216 ntBASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Gm24436-201ENSMUST00000157889 302 ntBASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Gm44481-201ENSMUST00000197288 84 ntBASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Gm44339-201ENSMUST00000200598 84 ntBASIC2.37□□□□□ -2.03
Ube3dQ8BX13 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Gm23264-201ENSMUST00000083372 107 ntBASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.37□□□□□ -2.03
Ube3dQ8BX13 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.36□□□□□ -2.03
Ube3dQ8BX13 Mir1195-201ENSMUST00000116818 98 ntBASIC2.36□□□□□ -2.03
Ube3dQ8BX13 Mir7242-201ENSMUST00000183710 79 ntBASIC2.36□□□□□ -2.03
Ube3dQ8BX13 Gm27792-201ENSMUST00000184031 115 ntBASIC2.36□□□□□ -2.03
Ube3dQ8BX13 Gm45452-201ENSMUST00000210905 177 ntBASIC2.36□□□□□ -2.03
Ube3dQ8BX13 Gm26458-201ENSMUST00000082832 128 ntBASIC2.36□□□□□ -2.03
Ube3dQ8BX13 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.36□□□□□ -2.03
Ube3dQ8BX13 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ube3dQ8BX13 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ube3dQ8BX13 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ube3dQ8BX13 Gm22486-201ENSMUST00000116815 137 ntBASIC2.35□□□□□ -2.03
Ube3dQ8BX13 Gm23656-201ENSMUST00000122626 112 ntBASIC2.35□□□□□ -2.03
Ube3dQ8BX13 Gm25153-201ENSMUST00000157118 156 ntBASIC2.35□□□□□ -2.03
Ube3dQ8BX13 Gm24475-201ENSMUST00000157435 143 ntBASIC2.35□□□□□ -2.03
Ube3dQ8BX13 Mir3086-201ENSMUST00000175072 87 ntBASIC2.35□□□□□ -2.03
Ube3dQ8BX13 Gm27668-201ENSMUST00000184188 120 ntBASIC2.35□□□□□ -2.03
Ube3dQ8BX13 Gm27786-201ENSMUST00000184337 70 ntBASIC2.35□□□□□ -2.03
Ube3dQ8BX13 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.35□□□□□ -2.03
Ube3dQ8BX13 Mir300-201ENSMUST00000083485 79 ntBASIC2.35□□□□□ -2.03
Ube3dQ8BX13 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Ube3dQ8BX13 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Ube3dQ8BX13 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ube3dQ8BX13 Gm44489-201ENSMUST00000104619 97 ntBASIC2.34□□□□□ -2.03
Ube3dQ8BX13 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.34□□□□□ -2.03
Ube3dQ8BX13 Gm22651-201ENSMUST00000157872 94 ntBASIC2.34□□□□□ -2.03
Ube3dQ8BX13 Snora3-201ENSMUST00000083082 132 ntBASIC2.34□□□□□ -2.03
Ube3dQ8BX13 Gm22866-201ENSMUST00000083947 177 ntBASIC2.34□□□□□ -2.03
Ube3dQ8BX13 Mir489-201ENSMUST00000093599 107 ntBASIC2.34□□□□□ -2.03
Ube3dQ8BX13 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ube3dQ8BX13 Snora36b-201ENSMUST00000104383 132 ntBASIC2.33□□□□□ -2.04
Ube3dQ8BX13 Gm26247-201ENSMUST00000116702 91 ntBASIC2.33□□□□□ -2.04
Ube3dQ8BX13 Gm26091-201ENSMUST00000122704 82 ntBASIC2.33□□□□□ -2.04
Ube3dQ8BX13 Gm23859-201ENSMUST00000158383 64 ntBASIC2.33□□□□□ -2.04
Ube3dQ8BX13 Mir7657-201ENSMUST00000196051 57 ntBASIC2.33□□□□□ -2.04
Ube3dQ8BX13 Snord43-201ENSMUST00000199549 108 ntBASIC2.33□□□□□ -2.04
Ube3dQ8BX13 Gm22576-201ENSMUST00000083733 104 ntBASIC2.33□□□□□ -2.04
Ube3dQ8BX13 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ube3dQ8BX13 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ube3dQ8BX13 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ube3dQ8BX13 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ube3dQ8BX13 Gm24122-201ENSMUST00000104107 132 ntBASIC2.32□□□□□ -2.04
Ube3dQ8BX13 Gm24291-201ENSMUST00000157633 162 ntBASIC2.32□□□□□ -2.04
Ube3dQ8BX13 Gm20718-201ENSMUST00000176058 259 ntBASIC2.32□□□□□ -2.04
Ube3dQ8BX13 Gm37796-201ENSMUST00000195327 134 ntBASIC2.32□□□□□ -2.04
Ube3dQ8BX13 Gm18346-201ENSMUST00000216782 325 ntBASIC2.32□□□□□ -2.04
Ube3dQ8BX13 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.32□□□□□ -2.04
Ube3dQ8BX13 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ube3dQ8BX13 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Ube3dQ8BX13 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm22228-201ENSMUST00000157364 101 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm26415-201ENSMUST00000157673 292 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm24681-201ENSMUST00000158760 107 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Mir3092-201ENSMUST00000174954 96 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm24926-201ENSMUST00000178053 79 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm22632-201ENSMUST00000178266 79 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm27979-201ENSMUST00000185126 56 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm45544-201ENSMUST00000211130 88 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm26326-201ENSMUST00000083070 129 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm23509-201ENSMUST00000083080 160 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Mir151-201ENSMUST00000083678 68 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ube3dQ8BX13 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Gm14568-201ENSMUST00000119321 294 ntBASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Gm24082-201ENSMUST00000175175 83 ntBASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Gm44966-201ENSMUST00000208096 157 ntBASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.3□□□□□ -2.04
Ube3dQ8BX13 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Gm8508-201ENSMUST00000061226 363 ntBASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Gm22283-201ENSMUST00000082556 161 ntBASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Gm25815-201ENSMUST00000082755 107 ntBASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Mir490-201ENSMUST00000093567 84 ntBASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Ube3dQ8BX13 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Ube3dQ8BX13 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.29□□□□□ -2.04
Ube3dQ8BX13 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 169.1 ms