Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Gm22454-201ENSMUST00000082583 107 ntBASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Gm24625-201ENSMUST00000082622 130 ntBASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm14502-201ENSMUST00000118154 113 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm23980-201ENSMUST00000157135 158 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm24246-201ENSMUST00000157315 132 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm23253-201ENSMUST00000157441 104 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm24718-201ENSMUST00000157521 136 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm22159-201ENSMUST00000158412 130 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm22947-201ENSMUST00000158559 91 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm26466-201ENSMUST00000179615 79 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm28912-201ENSMUST00000189001 234 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Gm42739-201ENSMUST00000200687 226 ntBASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Usp40Q8BWR4 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Usp40Q8BWR4 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Usp40Q8BWR4 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Usp40Q8BWR4 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Usp40Q8BWR4 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 Gm14568-201ENSMUST00000119321 294 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 Gm25828-201ENSMUST00000157087 95 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 Gm16561-201ENSMUST00000163001 192 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 Gm25678-201ENSMUST00000174984 73 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 Mir28b-201ENSMUST00000175399 80 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 Mir6997-201ENSMUST00000184313 71 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 Gm23509-201ENSMUST00000083080 160 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 Gm6185-201ENSMUST00000193379 3553 ntBASIC3.08□□□□□ -1.92
Usp40Q8BWR4 AC127302.3-201ENSMUST00000215480 2791 ntBASIC3.07□□□□□ -1.92
Usp40Q8BWR4 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Usp40Q8BWR4 Gm25289-201ENSMUST00000122799 119 ntBASIC3.07□□□□□ -1.92
Usp40Q8BWR4 Gm23665-201ENSMUST00000158054 62 ntBASIC3.07□□□□□ -1.92
Usp40Q8BWR4 Gm22382-201ENSMUST00000158185 130 ntBASIC3.07□□□□□ -1.92
Usp40Q8BWR4 Mir3083-201ENSMUST00000175377 64 ntBASIC3.07□□□□□ -1.92
Usp40Q8BWR4 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.07□□□□□ -1.92
Usp40Q8BWR4 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Usp40Q8BWR4 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.07□□□□□ -1.92
Usp40Q8BWR4 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.07□□□□□ -1.92
Usp40Q8BWR4 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.07□□□□□ -1.92
Usp40Q8BWR4 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Usp40Q8BWR4 AC160984.1-201ENSMUST00000225855 3154 ntBASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Mir466l-201ENSMUST00000104866 121 ntBASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Gm22193-201ENSMUST00000116868 76 ntBASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Gm24837-201ENSMUST00000158683 81 ntBASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Gm25367-201ENSMUST00000158846 106 ntBASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Mir7667-201ENSMUST00000183866 63 ntBASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usp40Q8BWR4 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Snord100-201ENSMUST00000116836 74 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Gm15289-201ENSMUST00000117793 244 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Gm11356-201ENSMUST00000118974 192 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Gm13588-201ENSMUST00000120026 135 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Gm8034-201ENSMUST00000178853 132 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Gm28169-201ENSMUST00000190342 345 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Gm25589-201ENSMUST00000082502 166 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
Usp40Q8BWR4 BC022960-201ENSMUST00000119987 1815 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Gm43473-201ENSMUST00000200442 5997 ntBASIC3.05□□□□□ -1.92
Usp40Q8BWR4 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Usp40Q8BWR4 Gm8260-201ENSMUST00000119230 353 ntBASIC3.04□□□□□ -1.92
Usp40Q8BWR4 Gm24846-201ENSMUST00000158033 108 ntBASIC3.04□□□□□ -1.92
Usp40Q8BWR4 Gm23194-201ENSMUST00000158813 105 ntBASIC3.04□□□□□ -1.92
Usp40Q8BWR4 Mir6350-201ENSMUST00000183639 105 ntBASIC3.04□□□□□ -1.92
Usp40Q8BWR4 Mir222-201ENSMUST00000083537 79 ntBASIC3.04□□□□□ -1.92
Usp40Q8BWR4 Gm26175-201ENSMUST00000083794 131 ntBASIC3.04□□□□□ -1.92
Usp40Q8BWR4 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.03□□□□□ -1.92
Usp40Q8BWR4 Gm22658-201ENSMUST00000104196 155 ntBASIC3.03□□□□□ -1.92
Usp40Q8BWR4 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Usp40Q8BWR4 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.03□□□□□ -1.92
Usp40Q8BWR4 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.03□□□□□ -1.92
Usp40Q8BWR4 Gm22354-201ENSMUST00000083919 70 ntBASIC3.03□□□□□ -1.92
Usp40Q8BWR4 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Usp40Q8BWR4 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.03□□□□□ -1.92
Usp40Q8BWR4 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.03□□□□□ -1.93
Usp40Q8BWR4 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Gm25091-201ENSMUST00000103997 71 ntBASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Gm23950-201ENSMUST00000104026 129 ntBASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Gm11253-201ENSMUST00000118486 201 ntBASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Gm23048-201ENSMUST00000157237 129 ntBASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Gm25059-201ENSMUST00000157367 117 ntBASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Gm25491-201ENSMUST00000158733 308 ntBASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Mir8103-201ENSMUST00000183945 107 ntBASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Gm37330-201ENSMUST00000192606 153 ntBASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Gm23723-201ENSMUST00000082996 132 ntBASIC3.02□□□□□ -1.93
Usp40Q8BWR4 Gm26077-201ENSMUST00000104064 123 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 139.2 ms