Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm14307-201ENSMUST00000118930 291 ntBASIC0.7□□□□□ -2.3
Ccdc40Q8BI79 Gm14297-201ENSMUST00000129110 291 ntBASIC0.7□□□□□ -2.3
Ccdc40Q8BI79 Gm16362-201ENSMUST00000135189 214 ntBASIC0.7□□□□□ -2.3
Ccdc40Q8BI79 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.7□□□□□ -2.3
Ccdc40Q8BI79 Gm27317-201ENSMUST00000183533 95 ntBASIC0.7□□□□□ -2.3
Ccdc40Q8BI79 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.7□□□□□ -2.3
Ccdc40Q8BI79 Gm44976-201ENSMUST00000205543 261 ntBASIC0.7□□□□□ -2.3
Ccdc40Q8BI79 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.7□□□□□ -2.3
Ccdc40Q8BI79 Gm26111-201ENSMUST00000083969 106 ntBASIC0.7□□□□□ -2.3
Ccdc40Q8BI79 Gm23779-201ENSMUST00000157938 64 ntBASIC0.69□□□□□ -2.3
Ccdc40Q8BI79 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.69□□□□□ -2.3
Ccdc40Q8BI79 Gm16404-201ENSMUST00000177739 468 ntBASIC0.69□□□□□ -2.3
Ccdc40Q8BI79 Gm14598-201ENSMUST00000180109 468 ntBASIC0.69□□□□□ -2.3
Ccdc40Q8BI79 Gm14625-201ENSMUST00000180231 468 ntBASIC0.69□□□□□ -2.3
Ccdc40Q8BI79 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Ccdc40Q8BI79 Mir468-201ENSMUST00000197332 78 ntBASIC0.69□□□□□ -2.3
Ccdc40Q8BI79 Mir376a-201ENSMUST00000197584 68 ntBASIC0.69□□□□□ -2.3
Ccdc40Q8BI79 Gm11834-201ENSMUST00000122257 585 ntBASIC0.68□□□□□ -2.3
Ccdc40Q8BI79 Gm23262-201ENSMUST00000158323 168 ntBASIC0.68□□□□□ -2.3
Ccdc40Q8BI79 Gm22114-201ENSMUST00000177756 107 ntBASIC0.68□□□□□ -2.3
Ccdc40Q8BI79 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Ccdc40Q8BI79 Gm22809-201ENSMUST00000082743 156 ntBASIC0.68□□□□□ -2.3
Ccdc40Q8BI79 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
Ccdc40Q8BI79 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Ccdc40Q8BI79 Gm25378-201ENSMUST00000104333 129 ntBASIC0.67□□□□□ -2.3
Ccdc40Q8BI79 Gm22522-201ENSMUST00000158271 151 ntBASIC0.67□□□□□ -2.3
Ccdc40Q8BI79 Gm22085-201ENSMUST00000158344 110 ntBASIC0.67□□□□□ -2.3
Ccdc40Q8BI79 Gm24678-201ENSMUST00000158756 104 ntBASIC0.67□□□□□ -2.3
Ccdc40Q8BI79 Gm28435-201ENSMUST00000185496 108 ntBASIC0.67□□□□□ -2.3
Ccdc40Q8BI79 Gm36956-201ENSMUST00000193830 214 ntBASIC0.67□□□□□ -2.3
Ccdc40Q8BI79 Gm45508-201ENSMUST00000209298 299 ntBASIC0.67□□□□□ -2.3
Ccdc40Q8BI79 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.67□□□□□ -2.3
Ccdc40Q8BI79 Gm24375-201ENSMUST00000104397 132 ntBASIC0.66□□□□□ -2.3
Ccdc40Q8BI79 Gm22796-201ENSMUST00000157234 106 ntBASIC0.66□□□□□ -2.3
Ccdc40Q8BI79 Gm23101-201ENSMUST00000157550 137 ntBASIC0.66□□□□□ -2.3
Ccdc40Q8BI79 Gm23665-201ENSMUST00000158054 62 ntBASIC0.66□□□□□ -2.3
Ccdc40Q8BI79 Gm44063-201ENSMUST00000203307 376 ntBASIC0.66□□□□□ -2.3
Ccdc40Q8BI79 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.65□□□□□ -2.31
Ccdc40Q8BI79 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.65□□□□□ -2.31
Ccdc40Q8BI79 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.64□□□□□ -2.31
Ccdc40Q8BI79 Gm25643-201ENSMUST00000158874 103 ntBASIC0.64□□□□□ -2.31
Ccdc40Q8BI79 Gm7654-201ENSMUST00000186738 683 ntBASIC0.64□□□□□ -2.31
Ccdc40Q8BI79 Gm44948-201ENSMUST00000209050 149 ntBASIC0.64□□□□□ -2.31
Ccdc40Q8BI79 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.64□□□□□ -2.31
Ccdc40Q8BI79 Gm25855-201ENSMUST00000082787 72 ntBASIC0.64□□□□□ -2.31
Ccdc40Q8BI79 Mir709-201ENSMUST00000102190 88 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Gm16265-201ENSMUST00000134558 108 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Gm22814-201ENSMUST00000157452 104 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Gm24000-201ENSMUST00000158063 89 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Gm28256-201ENSMUST00000188953 139 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Gm28559-201ENSMUST00000190532 139 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Gm23412-201ENSMUST00000083017 107 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Gm22421-201ENSMUST00000083058 107 ntBASIC0.63□□□□□ -2.31
Ccdc40Q8BI79 Snora24-201ENSMUST00000174989 130 ntBASIC0.62□□□□□ -2.31
Ccdc40Q8BI79 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.62□□□□□ -2.31
Ccdc40Q8BI79 Gm25820-201ENSMUST00000198589 127 ntBASIC0.62□□□□□ -2.31
Ccdc40Q8BI79 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.62□□□□□ -2.31
Ccdc40Q8BI79 Gm29818-201ENSMUST00000218070 165 ntBASIC0.62□□□□□ -2.31
Ccdc40Q8BI79 Gm22283-201ENSMUST00000082556 161 ntBASIC0.62□□□□□ -2.31
Ccdc40Q8BI79 Gm23536-201ENSMUST00000157541 134 ntBASIC0.61□□□□□ -2.31
Ccdc40Q8BI79 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.61□□□□□ -2.31
Ccdc40Q8BI79 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.61□□□□□ -2.31
Ccdc40Q8BI79 Gm15002-201ENSMUST00000118406 452 ntBASIC0.6□□□□□ -2.31
Ccdc40Q8BI79 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.6□□□□□ -2.31
Ccdc40Q8BI79 Gm24880-201ENSMUST00000158776 85 ntBASIC0.6□□□□□ -2.31
Ccdc40Q8BI79 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Ccdc40Q8BI79 Gm43406-201ENSMUST00000200356 334 ntBASIC0.6□□□□□ -2.31
Ccdc40Q8BI79 Gm23404-201ENSMUST00000082543 97 ntBASIC0.6□□□□□ -2.31
Ccdc40Q8BI79 Gm22321-201ENSMUST00000157152 104 ntBASIC0.59□□□□□ -2.31
Ccdc40Q8BI79 Gm27656-201ENSMUST00000185055 80 ntBASIC0.59□□□□□ -2.31
Ccdc40Q8BI79 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.59□□□□□ -2.31
Ccdc40Q8BI79 Gm44419-201ENSMUST00000203338 229 ntBASIC0.59□□□□□ -2.31
Ccdc40Q8BI79 Gm44057-201ENSMUST00000204547 96 ntBASIC0.59□□□□□ -2.31
Ccdc40Q8BI79 Gm23377-201ENSMUST00000082943 126 ntBASIC0.59□□□□□ -2.31
Ccdc40Q8BI79 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.59□□□□□ -2.31
Ccdc40Q8BI79 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.58□□□□□ -2.32
Ccdc40Q8BI79 Gm25968-201ENSMUST00000157167 100 ntBASIC0.58□□□□□ -2.32
Ccdc40Q8BI79 Gm25558-201ENSMUST00000158083 106 ntBASIC0.58□□□□□ -2.32
Ccdc40Q8BI79 Gm23571-201ENSMUST00000180073 127 ntBASIC0.58□□□□□ -2.32
Ccdc40Q8BI79 Gm42988-201ENSMUST00000198116 225 ntBASIC0.58□□□□□ -2.32
Ccdc40Q8BI79 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.58□□□□□ -2.32
Ccdc40Q8BI79 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.58□□□□□ -2.32
Ccdc40Q8BI79 Gm22302-201ENSMUST00000082657 106 ntBASIC0.58□□□□□ -2.32
Ccdc40Q8BI79 Gm23242-201ENSMUST00000083055 107 ntBASIC0.58□□□□□ -2.32
Ccdc40Q8BI79 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 Gm24629-201ENSMUST00000122762 89 ntBASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 Gm26274-201ENSMUST00000157103 321 ntBASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 Gm23584-201ENSMUST00000157655 129 ntBASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 Gm26484-201ENSMUST00000158018 106 ntBASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 Gm34015-201ENSMUST00000194908 451 ntBASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.57□□□□□ -2.32
Ccdc40Q8BI79 Gm24211-201ENSMUST00000158264 107 ntBASIC0.56□□□□□ -2.32
Ccdc40Q8BI79 Gm24323-201ENSMUST00000175342 77 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms