Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Gm24375-201ENSMUST00000104397 132 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Gm24015-201ENSMUST00000157725 232 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Gm25267-201ENSMUST00000158522 63 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Gm26024-201ENSMUST00000158657 322 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Gm21064-202ENSMUST00000190583 278 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Mir7021-201ENSMUST00000197026 63 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Gm43427-201ENSMUST00000198188 331 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Gm23113-201ENSMUST00000158477 99 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Gm5900-201ENSMUST00000179862 375 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Gm25636-201ENSMUST00000082666 133 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Gm26922-201ENSMUST00000082687 72 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Gm22169-201ENSMUST00000083229 107 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Gm24929-201ENSMUST00000083403 139 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 Gm25627-201ENSMUST00000084003 153 ntBASIC1.88□□□□□ -2.11
Ubfd1Q78JW9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm23718-201ENSMUST00000157350 307 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm24478-201ENSMUST00000157439 158 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm23181-201ENSMUST00000158685 110 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Mir3057-201ENSMUST00000175040 91 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Mir7678-201ENSMUST00000185076 71 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm37579-201ENSMUST00000194291 142 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm44325-201ENSMUST00000196757 77 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm44057-201ENSMUST00000204547 96 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm45654-201ENSMUST00000210980 123 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm22686-201ENSMUST00000082847 100 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm23377-201ENSMUST00000082943 126 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Mir221-201ENSMUST00000083488 95 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Gm22723-201ENSMUST00000083820 129 ntBASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ubfd1Q78JW9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.86□□□□□ -2.11
Ubfd1Q78JW9 Gm23469-201ENSMUST00000157131 104 ntBASIC1.86□□□□□ -2.11
Ubfd1Q78JW9 Gm25836-201ENSMUST00000158918 123 ntBASIC1.86□□□□□ -2.11
Ubfd1Q78JW9 Gm25401-201ENSMUST00000082975 106 ntBASIC1.86□□□□□ -2.11
Ubfd1Q78JW9 Mir34a-201ENSMUST00000083559 102 ntBASIC1.86□□□□□ -2.11
Ubfd1Q78JW9 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.86□□□□□ -2.11
Ubfd1Q78JW9 Gm25051-201ENSMUST00000158602 249 ntBASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 Gm23208-201ENSMUST00000158666 127 ntBASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 Gm27285-201ENSMUST00000183875 127 ntBASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 Gm26204-201ENSMUST00000082906 107 ntBASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 Mir302d-201ENSMUST00000083513 66 ntBASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ubfd1Q78JW9 Gm23010-201ENSMUST00000104151 126 ntBASIC1.84□□□□□ -2.11
Ubfd1Q78JW9 Gm26293-201ENSMUST00000104170 84 ntBASIC1.84□□□□□ -2.11
Ubfd1Q78JW9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.84□□□□□ -2.11
Ubfd1Q78JW9 Gm37624-201ENSMUST00000193751 219 ntBASIC1.84□□□□□ -2.11
Ubfd1Q78JW9 Gm25697-201ENSMUST00000082902 98 ntBASIC1.84□□□□□ -2.11
Ubfd1Q78JW9 Snord47-201ENSMUST00000083034 77 ntBASIC1.84□□□□□ -2.11
Ubfd1Q78JW9 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.84□□□□□ -2.11
Ubfd1Q78JW9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
Ubfd1Q78JW9 Gm22494-201ENSMUST00000104495 128 ntBASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Gm23898-201ENSMUST00000158111 103 ntBASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Gm24770-201ENSMUST00000158505 92 ntBASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Gm24634-201ENSMUST00000158672 107 ntBASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Gm21885-201ENSMUST00000178891 327 ntBASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Gm37778-201ENSMUST00000191732 190 ntBASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Mir30d-201ENSMUST00000083503 82 ntBASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubfd1Q78JW9 Gm23813-201ENSMUST00000175153 77 ntBASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 Gm24366-201ENSMUST00000175383 86 ntBASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 Gm23289-201ENSMUST00000175615 108 ntBASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 Gm44308-201ENSMUST00000197080 99 ntBASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 Mir721-201ENSMUST00000200230 88 ntBASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 Gm23100-201ENSMUST00000083455 141 ntBASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ubfd1Q78JW9 Gm24276-201ENSMUST00000102181 110 ntBASIC1.81□□□□□ -2.12
Ubfd1Q78JW9 Gm25464-201ENSMUST00000175481 107 ntBASIC1.81□□□□□ -2.12
Ubfd1Q78JW9 Mir6352-201ENSMUST00000184495 116 ntBASIC1.81□□□□□ -2.12
Ubfd1Q78JW9 Gm18188-201ENSMUST00000219386 478 ntBASIC1.81□□□□□ -2.12
Ubfd1Q78JW9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ubfd1Q78JW9 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ubfd1Q78JW9 Snord72-201ENSMUST00000104549 81 ntBASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Gm14674-201ENSMUST00000117816 342 ntBASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Gm24394-201ENSMUST00000158141 123 ntBASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 139.6 ms