Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm25697-201ENSMUST00000082902 98 ntBASIC1.85□□□□□ -2.11
Ddx58Q6Q899 Rny1-201ENSMUST00000083767 112 ntBASIC1.85□□□□□ -2.11
Ddx58Q6Q899 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.85□□□□□ -2.11
Ddx58Q6Q899 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.85□□□□□ -2.11
Ddx58Q6Q899 Gm23766-201ENSMUST00000103894 80 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm26026-201ENSMUST00000122726 123 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm23665-201ENSMUST00000158054 62 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Mir669k-201ENSMUST00000177742 127 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm23267-201ENSMUST00000178490 132 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm25936-201ENSMUST00000179952 114 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm25673-201ENSMUST00000179957 127 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Mir6351-201ENSMUST00000183826 99 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Mir7241-201ENSMUST00000184532 64 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm33866-201ENSMUST00000196911 289 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm45116-201ENSMUST00000207392 275 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm25627-201ENSMUST00000084003 153 ntBASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ddx58Q6Q899 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
Ddx58Q6Q899 Gm13797-201ENSMUST00000121792 120 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 Gm23718-201ENSMUST00000157350 307 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 Gm26092-201ENSMUST00000179798 97 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 Gm38183-201ENSMUST00000193189 205 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 Mir34a-201ENSMUST00000083559 102 ntBASIC1.83□□□□□ -2.12
Ddx58Q6Q899 Gm14837-201ENSMUST00000119688 206 ntBASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Gm12686-201ENSMUST00000120546 397 ntBASIC1.82□□□□□ -2.12
Ddx58Q6Q899 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Gm24385-201ENSMUST00000122694 350 ntBASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Gm23122-201ENSMUST00000157645 103 ntBASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Gm22675-201ENSMUST00000158430 104 ntBASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Gm23113-201ENSMUST00000158477 99 ntBASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Gm44052-201ENSMUST00000203382 396 ntBASIC1.82□□□□□ -2.12
Ddx58Q6Q899 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.82□□□□□ -2.12
Ddx58Q6Q899 Gm25315-201ENSMUST00000116823 121 ntBASIC1.81□□□□□ -2.12
Ddx58Q6Q899 Gm23841-201ENSMUST00000116951 114 ntBASIC1.81□□□□□ -2.12
Ddx58Q6Q899 Gm22603-201ENSMUST00000157603 96 ntBASIC1.81□□□□□ -2.12
Ddx58Q6Q899 Gm27579-201ENSMUST00000158113 63 ntBASIC1.81□□□□□ -2.12
Ddx58Q6Q899 Gm26004-201ENSMUST00000158804 116 ntBASIC1.81□□□□□ -2.12
Ddx58Q6Q899 Gm2962-201ENSMUST00000159266 336 ntBASIC1.81□□□□□ -2.12
Ddx58Q6Q899 Gm23967-201ENSMUST00000175062 78 ntBASIC1.81□□□□□ -2.12
Ddx58Q6Q899 Gm25935-201ENSMUST00000178746 107 ntBASIC1.81□□□□□ -2.12
Ddx58Q6Q899 Mir541-201ENSMUST00000102097 90 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Gm24375-201ENSMUST00000104397 132 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Gm25541-201ENSMUST00000116888 126 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Gm28020-201ENSMUST00000157739 67 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Mir1967-201ENSMUST00000157789 82 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Gm26482-201ENSMUST00000158015 62 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Gm22433-201ENSMUST00000158550 142 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Gm27493-201ENSMUST00000184128 78 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Gm25634-201ENSMUST00000082667 105 ntBASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ddx58Q6Q899 Gm22051-201ENSMUST00000117002 127 ntBASIC1.79□□□□□ -2.12
Ddx58Q6Q899 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.79□□□□□ -2.12
Ddx58Q6Q899 Gm16976-205ENSMUST00000227324 226 ntBASIC1.79□□□□□ -2.12
Ddx58Q6Q899 Gm25038-201ENSMUST00000082928 130 ntBASIC1.79□□□□□ -2.12
Ddx58Q6Q899 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Ddx58Q6Q899 Gm22545-201ENSMUST00000104350 132 ntBASIC1.78□□□□□ -2.12
Ddx58Q6Q899 Snord89-201ENSMUST00000104516 110 ntBASIC1.78□□□□□ -2.12
Ddx58Q6Q899 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.78□□□□□ -2.12
Ddx58Q6Q899 Gm26049-201ENSMUST00000157313 108 ntBASIC1.78□□□□□ -2.12
Ddx58Q6Q899 Gm27402-201ENSMUST00000183890 120 ntBASIC1.78□□□□□ -2.12
Ddx58Q6Q899 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.78□□□□□ -2.12
Ddx58Q6Q899 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.78□□□□□ -2.12
Ddx58Q6Q899 Gm25142-201ENSMUST00000082698 107 ntBASIC1.78□□□□□ -2.12
Ddx58Q6Q899 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.78□□□□□ -2.12
Ddx58Q6Q899 Mir653-201ENSMUST00000102402 85 ntBASIC1.77□□□□□ -2.13
Ddx58Q6Q899 Gm23898-201ENSMUST00000158111 103 ntBASIC1.77□□□□□ -2.13
Ddx58Q6Q899 Gm43602-201ENSMUST00000196772 300 ntBASIC1.77□□□□□ -2.13
Ddx58Q6Q899 Gm25538-201ENSMUST00000101943 107 ntBASIC1.76□□□□□ -2.13
Ddx58Q6Q899 Mir544-201ENSMUST00000103813 78 ntBASIC1.76□□□□□ -2.13
Ddx58Q6Q899 Gm23336-201ENSMUST00000117023 123 ntBASIC1.76□□□□□ -2.13
Ddx58Q6Q899 Gm23892-201ENSMUST00000158105 130 ntBASIC1.76□□□□□ -2.13
Ddx58Q6Q899 Gm22306-201ENSMUST00000082692 107 ntBASIC1.76□□□□□ -2.13
Ddx58Q6Q899 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.75□□□□□ -2.13
Ddx58Q6Q899 Gm23655-201ENSMUST00000122627 105 ntBASIC1.75□□□□□ -2.13
Ddx58Q6Q899 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.75□□□□□ -2.13
Ddx58Q6Q899 Gm26038-201ENSMUST00000158151 106 ntBASIC1.75□□□□□ -2.13
Ddx58Q6Q899 Gm44057-201ENSMUST00000204547 96 ntBASIC1.75□□□□□ -2.13
Ddx58Q6Q899 Gm24835-201ENSMUST00000116777 111 ntBASIC1.74□□□□□ -2.13
Ddx58Q6Q899 Gm25184-201ENSMUST00000157753 163 ntBASIC1.74□□□□□ -2.13
Ddx58Q6Q899 Gm23221-201ENSMUST00000158118 93 ntBASIC1.74□□□□□ -2.13
Ddx58Q6Q899 Gm20630-201ENSMUST00000177387 551 ntBASIC1.74□□□□□ -2.13
Ddx58Q6Q899 Gm23047-201ENSMUST00000177661 94 ntBASIC1.74□□□□□ -2.13
Ddx58Q6Q899 Gm21064-202ENSMUST00000190583 278 ntBASIC1.74□□□□□ -2.13
Ddx58Q6Q899 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.74□□□□□ -2.13
Ddx58Q6Q899 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Ddx58Q6Q899 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.73□□□□□ -2.13
Ddx58Q6Q899 Gm6897-201ENSMUST00000117714 138 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms