Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm23898-201ENSMUST00000158111 103 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 Mir6375-201ENSMUST00000197176 95 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 Gm45859-201ENSMUST00000212794 214 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 Gm22306-201ENSMUST00000082692 107 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.69□□□□□ -2.14
Smarca1Q6PGB8 Gm22545-201ENSMUST00000104350 132 ntBASIC1.69□□□□□ -2.14
Smarca1Q6PGB8 Gm23705-201ENSMUST00000104370 130 ntBASIC1.69□□□□□ -2.14
Smarca1Q6PGB8 Gm25541-201ENSMUST00000116888 126 ntBASIC1.69□□□□□ -2.14
Smarca1Q6PGB8 Gm33866-201ENSMUST00000196911 289 ntBASIC1.69□□□□□ -2.14
Smarca1Q6PGB8 Gm25142-201ENSMUST00000082698 107 ntBASIC1.69□□□□□ -2.14
Smarca1Q6PGB8 Gm25038-201ENSMUST00000082928 130 ntBASIC1.69□□□□□ -2.14
Smarca1Q6PGB8 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.69□□□□□ -2.14
Smarca1Q6PGB8 Gm13797-201ENSMUST00000121792 120 ntBASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Gm24222-201ENSMUST00000158834 93 ntBASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Snora15-201ENSMUST00000177461 131 ntBASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Gm37715-201ENSMUST00000193206 235 ntBASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Gm46993-201ENSMUST00000220708 259 ntBASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Gm25697-201ENSMUST00000082902 98 ntBASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.68□□□□□ -2.14
Smarca1Q6PGB8 Mir653-201ENSMUST00000102402 85 ntBASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Mir544-201ENSMUST00000103813 78 ntBASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Gm25653-201ENSMUST00000158473 138 ntBASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Gm25935-201ENSMUST00000178746 107 ntBASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Gm25936-201ENSMUST00000179952 114 ntBASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Mir7665-201ENSMUST00000184907 63 ntBASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Gm45116-201ENSMUST00000207392 275 ntBASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Mir34a-201ENSMUST00000083559 102 ntBASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Smarca1Q6PGB8 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Gm24375-201ENSMUST00000104397 132 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Gm22149-201ENSMUST00000104442 136 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Gm23841-201ENSMUST00000116951 114 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Mir1967-201ENSMUST00000157789 82 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Gm26482-201ENSMUST00000158015 62 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Gm23113-201ENSMUST00000158477 99 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Gm38183-201ENSMUST00000193189 205 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Gm43911-201ENSMUST00000203097 76 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Gm25634-201ENSMUST00000082667 105 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Rny1-201ENSMUST00000083767 112 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 BC022960-201ENSMUST00000119987 1815 ntBASIC1.66□□□□□ -2.14
Smarca1Q6PGB8 Gm25538-201ENSMUST00000101943 107 ntBASIC1.65□□□□□ -2.15
Smarca1Q6PGB8 Gm12686-201ENSMUST00000120546 397 ntBASIC1.65□□□□□ -2.15
Smarca1Q6PGB8 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.65□□□□□ -2.15
Smarca1Q6PGB8 Gm23221-201ENSMUST00000158118 93 ntBASIC1.65□□□□□ -2.15
Smarca1Q6PGB8 Mir1931-201ENSMUST00000158589 119 ntBASIC1.65□□□□□ -2.15
Smarca1Q6PGB8 Gm44353-201ENSMUST00000200618 138 ntBASIC1.65□□□□□ -2.15
Smarca1Q6PGB8 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Smarca1Q6PGB8 Mir490-201ENSMUST00000093567 84 ntBASIC1.65□□□□□ -2.15
Smarca1Q6PGB8 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
Smarca1Q6PGB8 Gm26082-201ENSMUST00000104070 127 ntBASIC1.64□□□□□ -2.15
Smarca1Q6PGB8 Gm25958-201ENSMUST00000175114 71 ntBASIC1.64□□□□□ -2.15
Smarca1Q6PGB8 Mir3061-201ENSMUST00000175129 91 ntBASIC1.64□□□□□ -2.15
Smarca1Q6PGB8 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.64□□□□□ -2.15
Smarca1Q6PGB8 Gm43602-201ENSMUST00000196772 300 ntBASIC1.64□□□□□ -2.15
Smarca1Q6PGB8 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Smarca1Q6PGB8 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Smarca1Q6PGB8 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Mir541-201ENSMUST00000102097 90 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Gm23060-201ENSMUST00000102345 109 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Gm24590-201ENSMUST00000116699 119 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Gm25720-201ENSMUST00000157503 105 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Gm23542-201ENSMUST00000158208 96 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Gm22675-201ENSMUST00000158430 104 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Mir5104-201ENSMUST00000175319 94 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Gm23419-201ENSMUST00000175523 84 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Gm23977-201ENSMUST00000177871 74 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Gm44052-201ENSMUST00000203382 396 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Gm22743-201ENSMUST00000083445 133 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.63□□□□□ -2.15
Smarca1Q6PGB8 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 Gm22228-201ENSMUST00000157364 101 ntBASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 Gm23277-201ENSMUST00000157914 136 ntBASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 Gm23892-201ENSMUST00000158105 130 ntBASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 Gm44057-201ENSMUST00000204547 96 ntBASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 Gm44962-201ENSMUST00000206460 279 ntBASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.62□□□□□ -2.15
Smarca1Q6PGB8 Gm23336-201ENSMUST00000117023 123 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Gm11334-201ENSMUST00000121969 156 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Mir1898-201ENSMUST00000122643 83 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Gm28020-201ENSMUST00000157739 67 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Gm26038-201ENSMUST00000158151 106 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Mir3968-201ENSMUST00000175355 100 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Gm25750-201ENSMUST00000175483 112 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Gm23047-201ENSMUST00000177661 94 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 161.6 ms