Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm44308-201ENSMUST00000197080 99 ntBASIC2.61□□□□□ -1.99
Scaf4Q6PFF0 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.61□□□□□ -1.99
Scaf4Q6PFF0 Gm25851-201ENSMUST00000082794 107 ntBASIC2.61□□□□□ -1.99
Scaf4Q6PFF0 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.61□□□□□ -1.99
Scaf4Q6PFF0 Mir489-201ENSMUST00000093599 107 ntBASIC2.61□□□□□ -1.99
Scaf4Q6PFF0 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
Scaf4Q6PFF0 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 Mir547-201ENSMUST00000102051 78 ntBASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 Gm13862-201ENSMUST00000121220 197 ntBASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 Gm24559-201ENSMUST00000157519 121 ntBASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 Gm26411-201ENSMUST00000157668 107 ntBASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 Gm5224-201ENSMUST00000183060 350 ntBASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 Mir6353-201ENSMUST00000183596 113 ntBASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 Gm22306-201ENSMUST00000082692 107 ntBASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Scaf4Q6PFF0 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Gm25500-201ENSMUST00000104426 123 ntBASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Gm24879-201ENSMUST00000158386 143 ntBASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Gm8034-201ENSMUST00000178853 132 ntBASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Gm44555-201ENSMUST00000209008 148 ntBASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.59□□□□□ -1.99
Scaf4Q6PFF0 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Scaf4Q6PFF0 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Scaf4Q6PFF0 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Scaf4Q6PFF0 Gm25308-201ENSMUST00000104171 158 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 Gm14709-201ENSMUST00000121225 304 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 Gm23600-201ENSMUST00000157260 71 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 Gm24787-201ENSMUST00000157380 123 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 Gm23113-201ENSMUST00000158477 99 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 Gm20718-201ENSMUST00000176058 259 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 Gm23249-201ENSMUST00000083369 161 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scaf4Q6PFF0 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.58□□□□□ -2
Scaf4Q6PFF0 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.57□□□□□ -2
Scaf4Q6PFF0 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scaf4Q6PFF0 Gm24171-201ENSMUST00000104126 131 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 Gm16265-201ENSMUST00000134558 108 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 Gm23391-201ENSMUST00000157579 104 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 Gm26864-201ENSMUST00000181346 156 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 Gm44464-201ENSMUST00000198010 138 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 Gm44478-201ENSMUST00000204875 114 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 Gm45429-201ENSMUST00000209527 172 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 Gm9370-201ENSMUST00000222787 609 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 Gm25124-201ENSMUST00000083345 164 ntBASIC2.57□□□□□ -2
Scaf4Q6PFF0 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scaf4Q6PFF0 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.56□□□□□ -2
Scaf4Q6PFF0 Gm25045-201ENSMUST00000122670 99 ntBASIC2.56□□□□□ -2
Scaf4Q6PFF0 Gm22163-201ENSMUST00000158408 135 ntBASIC2.56□□□□□ -2
Scaf4Q6PFF0 Gm25490-201ENSMUST00000158734 130 ntBASIC2.56□□□□□ -2
Scaf4Q6PFF0 Snord50a-201ENSMUST00000178154 72 ntBASIC2.56□□□□□ -2
Scaf4Q6PFF0 Gm24463-201ENSMUST00000178417 72 ntBASIC2.56□□□□□ -2
Scaf4Q6PFF0 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.56□□□□□ -2
Scaf4Q6PFF0 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scaf4Q6PFF0 Gm23654-201ENSMUST00000116758 126 ntBASIC2.55□□□□□ -2
Scaf4Q6PFF0 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.55□□□□□ -2
Scaf4Q6PFF0 Gm25280-201ENSMUST00000157269 101 ntBASIC2.55□□□□□ -2
Scaf4Q6PFF0 Gm23223-201ENSMUST00000158119 127 ntBASIC2.55□□□□□ -2
Scaf4Q6PFF0 Gm25488-201ENSMUST00000158728 118 ntBASIC2.55□□□□□ -2
Scaf4Q6PFF0 Mir6993-201ENSMUST00000184912 65 ntBASIC2.55□□□□□ -2
Scaf4Q6PFF0 Gm37807-201ENSMUST00000194310 190 ntBASIC2.55□□□□□ -2
Scaf4Q6PFF0 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scaf4Q6PFF0 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.55□□□□□ -2
Scaf4Q6PFF0 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
Scaf4Q6PFF0 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scaf4Q6PFF0 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Scaf4Q6PFF0 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scaf4Q6PFF0 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm25168-201ENSMUST00000104189 132 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm22679-201ENSMUST00000116975 100 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm24627-201ENSMUST00000122764 138 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm22451-201ENSMUST00000122803 151 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm15281-201ENSMUST00000125181 351 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm23980-201ENSMUST00000157135 158 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm24911-201ENSMUST00000157292 136 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm25771-201ENSMUST00000158565 144 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm6788-201ENSMUST00000166459 270 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Mir3083-201ENSMUST00000175377 64 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Gm43626-201ENSMUST00000198575 162 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scaf4Q6PFF0 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.54□□□□□ -2
Scaf4Q6PFF0 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.53□□□□□ -2
Scaf4Q6PFF0 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.53□□□□□ -2
Scaf4Q6PFF0 Gm24468-201ENSMUST00000104489 104 ntBASIC2.53□□□□□ -2
Scaf4Q6PFF0 Gm22486-201ENSMUST00000116815 137 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms