Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm27694-201ENSMUST00000184740 86 ntBASIC1.47□□□□□ -2.17
Snrnp40Q6PE01 Gm27544-201ENSMUST00000185069 155 ntBASIC1.47□□□□□ -2.17
Snrnp40Q6PE01 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.47□□□□□ -2.17
Snrnp40Q6PE01 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.47□□□□□ -2.17
Snrnp40Q6PE01 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.47□□□□□ -2.17
Snrnp40Q6PE01 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.47□□□□□ -2.17
Snrnp40Q6PE01 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Snrnp40Q6PE01 Gm24038-201ENSMUST00000082872 159 ntBASIC1.47□□□□□ -2.17
Snrnp40Q6PE01 Mir320-201ENSMUST00000083594 82 ntBASIC1.47□□□□□ -2.17
Snrnp40Q6PE01 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Gm26082-201ENSMUST00000104070 127 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Gm24374-201ENSMUST00000104394 106 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Gm14709-201ENSMUST00000121225 304 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Gm25390-201ENSMUST00000157341 103 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Gm26181-201ENSMUST00000157687 106 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Gm25654-201ENSMUST00000158467 88 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Gm20630-201ENSMUST00000177387 551 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Mir6379-201ENSMUST00000183392 115 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Gm37715-201ENSMUST00000193206 235 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 Mir155-201ENSMUST00000083463 65 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.46□□□□□ -2.18
Snrnp40Q6PE01 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm24595-201ENSMUST00000122501 110 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm22228-201ENSMUST00000157364 101 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm23892-201ENSMUST00000158105 130 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm2962-201ENSMUST00000159266 336 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm24366-201ENSMUST00000175383 86 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm22621-201ENSMUST00000179678 74 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm27894-201ENSMUST00000184177 92 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm28383-201ENSMUST00000187563 139 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm29262-201ENSMUST00000190084 196 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm6105-201ENSMUST00000200580 624 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Mir146-201ENSMUST00000083667 65 ntBASIC1.45□□□□□ -2.18
Snrnp40Q6PE01 Gm14491-201ENSMUST00000121919 199 ntBASIC1.44□□□□□ -2.18
Snrnp40Q6PE01 Gm24594-201ENSMUST00000122502 99 ntBASIC1.44□□□□□ -2.18
Snrnp40Q6PE01 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.44□□□□□ -2.18
Snrnp40Q6PE01 Gm25749-201ENSMUST00000175485 111 ntBASIC1.44□□□□□ -2.18
Snrnp40Q6PE01 Gm24656-201ENSMUST00000177548 132 ntBASIC1.44□□□□□ -2.18
Snrnp40Q6PE01 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.44□□□□□ -2.18
Snrnp40Q6PE01 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.44□□□□□ -2.18
Snrnp40Q6PE01 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.44□□□□□ -2.18
Snrnp40Q6PE01 Gm6897-201ENSMUST00000117714 138 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Gm14838-201ENSMUST00000118913 248 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Gm14758-201ENSMUST00000119104 138 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Mir3968-201ENSMUST00000175355 100 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Gm23571-201ENSMUST00000180073 127 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Mir8119-201ENSMUST00000183371 129 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Gm27585-201ENSMUST00000183717 199 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Gm16976-205ENSMUST00000227324 226 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Gm25482-201ENSMUST00000083225 107 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Gm24762-201ENSMUST00000083689 104 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Gm24261-201ENSMUST00000083744 104 ntBASIC1.43□□□□□ -2.18
Snrnp40Q6PE01 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Gm25958-201ENSMUST00000175114 71 ntBASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Mir7039-201ENSMUST00000183852 85 ntBASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Gm29014-201ENSMUST00000191422 326 ntBASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Mir6962-201ENSMUST00000199512 63 ntBASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.42□□□□□ -2.18
Snrnp40Q6PE01 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Mir467g-201ENSMUST00000116906 120 ntBASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Gm26279-201ENSMUST00000157095 102 ntBASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Gm25884-201ENSMUST00000157782 62 ntBASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Gm28409-201ENSMUST00000187064 103 ntBASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Gm45116-201ENSMUST00000207392 275 ntBASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Snrnp40Q6PE01 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.4□□□□□ -2.18
Snrnp40Q6PE01 Gm24121-201ENSMUST00000102029 106 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Gm22673-201ENSMUST00000104415 131 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Gm23336-201ENSMUST00000117023 123 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Gm13797-201ENSMUST00000121792 120 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Gm23584-201ENSMUST00000157655 129 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Mir1967-201ENSMUST00000157789 82 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Gm25015-201ENSMUST00000158400 128 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Gm24415-201ENSMUST00000180218 107 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Mir6240-201ENSMUST00000184281 117 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Gm33866-201ENSMUST00000196911 289 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Gm42719-201ENSMUST00000197393 355 ntBASIC1.4□□□□□ -2.19
Snrnp40Q6PE01 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
Snrnp40Q6PE01 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Snrnp40Q6PE01 Gm11204-201ENSMUST00000122438 147 ntBASIC1.39□□□□□ -2.19
Snrnp40Q6PE01 Gm23122-201ENSMUST00000157645 103 ntBASIC1.39□□□□□ -2.19
Snrnp40Q6PE01 Gm25038-201ENSMUST00000082928 130 ntBASIC1.39□□□□□ -2.19
Snrnp40Q6PE01 Gm24406-201ENSMUST00000083026 128 ntBASIC1.39□□□□□ -2.19
Snrnp40Q6PE01 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.39□□□□□ -2.19
Snrnp40Q6PE01 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 236.7 ms