Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Snord100-201ENSMUST00000116836 74 ntBASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 Gm5900-201ENSMUST00000179862 375 ntBASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 Gm27672-201ENSMUST00000183751 204 ntBASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 Gm29603-201ENSMUST00000186792 334 ntBASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 Gm24805-201ENSMUST00000082931 104 ntBASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 Gm23100-201ENSMUST00000083455 141 ntBASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 Gm22228-201ENSMUST00000157364 101 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Gm22336-201ENSMUST00000157719 107 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Gm25866-201ENSMUST00000158245 112 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Gm26403-201ENSMUST00000158500 105 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Gm26360-201ENSMUST00000158872 103 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Gm21885-201ENSMUST00000178891 327 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Gm28409-201ENSMUST00000187064 103 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Mir7021-201ENSMUST00000197026 63 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Rnf220Q6PDX6 Gm22752-201ENSMUST00000102083 109 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Mir344c-201ENSMUST00000103919 92 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Gm24937-201ENSMUST00000122597 134 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Gm24358-201ENSMUST00000158424 288 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Gm24922-201ENSMUST00000158511 102 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Gm25716-201ENSMUST00000158628 104 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Gm37116-201ENSMUST00000195161 147 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Gm44938-201ENSMUST00000208614 427 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Gm22743-201ENSMUST00000083445 133 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Mir488-201ENSMUST00000093595 109 ntBASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Rnf220Q6PDX6 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Rnf220Q6PDX6 Gm24068-201ENSMUST00000104513 132 ntBASIC2.01□□□□□ -2.09
Rnf220Q6PDX6 Mir1298-201ENSMUST00000116681 98 ntBASIC2.01□□□□□ -2.09
Rnf220Q6PDX6 Gm14567-201ENSMUST00000117155 174 ntBASIC2.01□□□□□ -2.09
Rnf220Q6PDX6 Gm14775-201ENSMUST00000122089 310 ntBASIC2.01□□□□□ -2.09
Rnf220Q6PDX6 Gm24691-201ENSMUST00000157762 140 ntBASIC2.01□□□□□ -2.09
Rnf220Q6PDX6 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.01□□□□□ -2.09
Rnf220Q6PDX6 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.01□□□□□ -2.09
Rnf220Q6PDX6 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Rnf220Q6PDX6 Gm24559-201ENSMUST00000157519 121 ntBASIC2□□□□□ -2.09
Rnf220Q6PDX6 Gm22842-201ENSMUST00000157709 118 ntBASIC2□□□□□ -2.09
Rnf220Q6PDX6 Gm25460-201ENSMUST00000157954 127 ntBASIC2□□□□□ -2.09
Rnf220Q6PDX6 Gm24900-201ENSMUST00000158128 134 ntBASIC2□□□□□ -2.09
Rnf220Q6PDX6 Mir6917-201ENSMUST00000184111 61 ntBASIC2□□□□□ -2.09
Rnf220Q6PDX6 Mir21b-201ENSMUST00000184317 108 ntBASIC2□□□□□ -2.09
Rnf220Q6PDX6 Gm27517-201ENSMUST00000184347 236 ntBASIC2□□□□□ -2.09
Rnf220Q6PDX6 Gm44464-201ENSMUST00000198010 138 ntBASIC2□□□□□ -2.09
Rnf220Q6PDX6 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2□□□□□ -2.09
Rnf220Q6PDX6 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Rnf220Q6PDX6 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 Gm25878-201ENSMUST00000104327 93 ntBASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 Mir1195-201ENSMUST00000116818 98 ntBASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 Gm24656-201ENSMUST00000177548 132 ntBASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 Gm27532-201ENSMUST00000183726 113 ntBASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 Gm29613-201ENSMUST00000185846 313 ntBASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 Gm29544-201ENSMUST00000188860 313 ntBASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 Gm28808-201ENSMUST00000190978 313 ntBASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 Gm42623-201ENSMUST00000197225 379 ntBASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.99□□□□□ -2.09
Rnf220Q6PDX6 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Gm14671-201ENSMUST00000121790 262 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Gm22517-201ENSMUST00000158265 136 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Gm26214-201ENSMUST00000158581 107 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Mir1966-201ENSMUST00000158807 108 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Gm23005-201ENSMUST00000158950 136 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Mir3092-201ENSMUST00000174954 96 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Mir6916-201ENSMUST00000184514 63 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Gm22738-201ENSMUST00000083440 147 ntBASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Rnf220Q6PDX6 Gm14674-201ENSMUST00000117816 342 ntBASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Gm22387-201ENSMUST00000158191 131 ntBASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Gm22612-201ENSMUST00000158293 101 ntBASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Gm22888-201ENSMUST00000158640 77 ntBASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Gm25035-201ENSMUST00000175414 77 ntBASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Rnf220Q6PDX6 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Gm26074-201ENSMUST00000104063 129 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Gm24122-201ENSMUST00000104107 132 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Gm23080-201ENSMUST00000157846 103 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Gm17528-201ENSMUST00000171026 239 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Gm22699-201ENSMUST00000175376 105 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Gm25750-201ENSMUST00000175483 112 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Mir6925-201ENSMUST00000197857 70 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Gm43749-201ENSMUST00000199345 352 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Gm45544-201ENSMUST00000211130 88 ntBASIC1.96□□□□□ -2.1
Rnf220Q6PDX6 Gm25409-201ENSMUST00000083764 131 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 175.6 ms