Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm16539-201ENSMUST00000160086 327 ntBASIC0.18□□□□□ -2.38
Ptch1Q61115 Gm27475-201ENSMUST00000183420 61 ntBASIC0.18□□□□□ -2.38
Ptch1Q61115 Mir6365-201ENSMUST00000183990 101 ntBASIC0.18□□□□□ -2.38
Ptch1Q61115 Gm27957-201ENSMUST00000184054 127 ntBASIC0.18□□□□□ -2.38
Ptch1Q61115 Mir7065-201ENSMUST00000185110 61 ntBASIC0.18□□□□□ -2.38
Ptch1Q61115 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.18□□□□□ -2.38
Ptch1Q61115 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.18□□□□□ -2.38
Ptch1Q61115 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.18□□□□□ -2.38
Ptch1Q61115 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.18□□□□□ -2.38
Ptch1Q61115 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.18□□□□□ -2.38
Ptch1Q61115 Gm22706-201ENSMUST00000157907 112 ntBASIC0.17□□□□□ -2.38
Ptch1Q61115 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.17□□□□□ -2.38
Ptch1Q61115 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Ptch1Q61115 Gm22685-201ENSMUST00000082848 106 ntBASIC0.17□□□□□ -2.38
Ptch1Q61115 Gm24616-201ENSMUST00000083274 139 ntBASIC0.17□□□□□ -2.38
Ptch1Q61115 Mir500-201ENSMUST00000093600 92 ntBASIC0.17□□□□□ -2.38
Ptch1Q61115 Gm25109-201ENSMUST00000122474 114 ntBASIC0.16□□□□□ -2.38
Ptch1Q61115 Gm25434-201ENSMUST00000158278 167 ntBASIC0.16□□□□□ -2.38
Ptch1Q61115 Gm28256-201ENSMUST00000188953 139 ntBASIC0.16□□□□□ -2.38
Ptch1Q61115 Gm28559-201ENSMUST00000190532 139 ntBASIC0.16□□□□□ -2.38
Ptch1Q61115 Gm45119-201ENSMUST00000207612 199 ntBASIC0.16□□□□□ -2.38
Ptch1Q61115 Gm45543-201ENSMUST00000209327 88 ntBASIC0.16□□□□□ -2.38
Ptch1Q61115 Gm45541-201ENSMUST00000210443 54 ntBASIC0.16□□□□□ -2.38
Ptch1Q61115 Gm5023-201ENSMUST00000217442 587 ntBASIC0.16□□□□□ -2.38
Ptch1Q61115 Gm18113-201ENSMUST00000220630 303 ntBASIC0.16□□□□□ -2.38
Ptch1Q61115 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.15□□□□□ -2.39
Ptch1Q61115 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.15□□□□□ -2.39
Ptch1Q61115 Mir767-201ENSMUST00000103256 107 ntBASIC0.14□□□□□ -2.39
Ptch1Q61115 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.14□□□□□ -2.39
Ptch1Q61115 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.14□□□□□ -2.39
Ptch1Q61115 Gm12837-201ENSMUST00000120131 373 ntBASIC0.14□□□□□ -2.39
Ptch1Q61115 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.14□□□□□ -2.39
Ptch1Q61115 Gm24549-201ENSMUST00000158647 139 ntBASIC0.14□□□□□ -2.39
Ptch1Q61115 Gm23024-201ENSMUST00000158770 292 ntBASIC0.14□□□□□ -2.39
Ptch1Q61115 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.14□□□□□ -2.39
Ptch1Q61115 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
Ptch1Q61115 Gm23016-201ENSMUST00000158431 62 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm25284-201ENSMUST00000180345 141 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm24527-201ENSMUST00000082920 107 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm26164-201ENSMUST00000083793 104 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Snord89-201ENSMUST00000104516 110 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm24833-201ENSMUST00000116775 120 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm11798-201ENSMUST00000119150 421 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm17528-201ENSMUST00000171026 239 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm24818-201ENSMUST00000175093 161 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm42988-201ENSMUST00000198116 225 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Snord49b-201ENSMUST00000082503 72 ntBASIC0.13□□□□□ -2.39
Ptch1Q61115 Gm24283-201ENSMUST00000104233 107 ntBASIC0.12□□□□□ -2.39
Ptch1Q61115 Gm26424-201ENSMUST00000122530 104 ntBASIC0.12□□□□□ -2.39
Ptch1Q61115 Mir1931-201ENSMUST00000158589 119 ntBASIC0.12□□□□□ -2.39
Ptch1Q61115 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.12□□□□□ -2.39
Ptch1Q61115 Gm26168-201ENSMUST00000083787 112 ntBASIC0.12□□□□□ -2.39
Ptch1Q61115 Gm11904-201ENSMUST00000120562 248 ntBASIC0.11□□□□□ -2.39
Ptch1Q61115 Gm24909-201ENSMUST00000157290 280 ntBASIC0.11□□□□□ -2.39
Ptch1Q61115 Gm25558-201ENSMUST00000158083 106 ntBASIC0.11□□□□□ -2.39
Ptch1Q61115 Mir3108-201ENSMUST00000175500 79 ntBASIC0.11□□□□□ -2.39
Ptch1Q61115 Gm25314-201ENSMUST00000178810 79 ntBASIC0.11□□□□□ -2.39
Ptch1Q61115 Gm27919-201ENSMUST00000185163 107 ntBASIC0.11□□□□□ -2.39
Ptch1Q61115 Gm25611-201ENSMUST00000104017 133 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Gm11386-201ENSMUST00000117761 347 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Gm22337-201ENSMUST00000157721 132 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Gm23416-201ENSMUST00000175520 95 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.1□□□□□ -2.39
Ptch1Q61115 Gm18185-201ENSMUST00000186725 667 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Gm6003-201ENSMUST00000187903 463 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.1□□□□□ -2.39
Ptch1Q61115 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Gm22283-201ENSMUST00000082556 161 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Snord95-201ENSMUST00000082846 68 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Mir30a-201ENSMUST00000083471 71 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.1□□□□□ -2.39
Ptch1Q61115 Gm14536-201ENSMUST00000118324 138 ntBASIC0.09□□□□□ -2.4
Ptch1Q61115 Gm13711-201ENSMUST00000119708 453 ntBASIC0.09□□□□□ -2.4
Ptch1Q61115 Gm15027-201ENSMUST00000120922 138 ntBASIC0.09□□□□□ -2.4
Ptch1Q61115 Gm38208-201ENSMUST00000192476 114 ntBASIC0.09□□□□□ -2.4
Ptch1Q61115 Gm44473-201ENSMUST00000204039 152 ntBASIC0.09□□□□□ -2.4
Ptch1Q61115 Gm25802-201ENSMUST00000082639 77 ntBASIC0.09□□□□□ -2.4
Ptch1Q61115 Gm25855-201ENSMUST00000082787 72 ntBASIC0.09□□□□□ -2.4
Ptch1Q61115 Gm24880-201ENSMUST00000158776 85 ntBASIC0.08□□□□□ -2.4
Ptch1Q61115 Gm18291-201ENSMUST00000190791 301 ntBASIC0.08□□□□□ -2.4
Ptch1Q61115 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.08□□□□□ -2.4
Ptch1Q61115 Gm43884-201ENSMUST00000204251 559 ntBASIC0.08□□□□□ -2.4
Ptch1Q61115 Gm45402-201ENSMUST00000211796 223 ntBASIC0.08□□□□□ -2.4
Ptch1Q61115 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.08□□□□□ -2.4
Ptch1Q61115 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.08□□□□□ -2.4
Ptch1Q61115 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms