Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm27385-201ENSMUST00000184747 104 ntBASIC-0.84□□□□□ -2.54
Trav3-1Q5R1I8 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.84□□□□□ -2.54
Trav3-1Q5R1I8 Gm44063-201ENSMUST00000203307 376 ntBASIC-0.84□□□□□ -2.54
Trav3-1Q5R1I8 AC154506.3-201ENSMUST00000225417 213 ntBASIC-0.84□□□□□ -2.54
Trav3-1Q5R1I8 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.84□□□□□ -2.54
Trav3-1Q5R1I8 Gm25274-201ENSMUST00000104296 135 ntBASIC-0.85□□□□□ -2.55
Trav3-1Q5R1I8 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.85□□□□□ -2.55
Trav3-1Q5R1I8 Gm25805-201ENSMUST00000122788 108 ntBASIC-0.85□□□□□ -2.55
Trav3-1Q5R1I8 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.85□□□□□ -2.55
Trav3-1Q5R1I8 Gm24799-201ENSMUST00000178431 79 ntBASIC-0.85□□□□□ -2.55
Trav3-1Q5R1I8 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.85□□□□□ -2.55
Trav3-1Q5R1I8 Gm18296-201ENSMUST00000192475 783 ntBASIC-0.85□□□□□ -2.55
Trav3-1Q5R1I8 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.85□□□□□ -2.55
Trav3-1Q5R1I8 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Gm26135-201ENSMUST00000101993 72 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Snord50b-201ENSMUST00000178497 72 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Mir721-201ENSMUST00000200230 88 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 AC144733.1-201ENSMUST00000222893 1289 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Gm25131-201ENSMUST00000082653 151 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Snora20-201ENSMUST00000082703 128 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Mir377-201ENSMUST00000083504 68 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Mir344-201ENSMUST00000083634 95 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 AC133079.1-201ENSMUST00000220943 1881 ntBASIC-0.86□□□□□ -2.55
Trav3-1Q5R1I8 Gm23013-201ENSMUST00000104146 106 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Mir7050-201ENSMUST00000184636 60 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 AC156790.3-201ENSMUST00000226200 254 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Gm22572-201ENSMUST00000082985 105 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Gm23093-201ENSMUST00000083450 102 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Mir200b-201ENSMUST00000083615 70 ntBASIC-0.87□□□□□ -2.55
Trav3-1Q5R1I8 Mir450-2-201ENSMUST00000102444 69 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm24768-201ENSMUST00000158512 94 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Spanxn4-201ENSMUST00000172433 424 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm28926-201ENSMUST00000191063 680 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 CT025689.4-201ENSMUST00000225926 601 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-0.88□□□□□ -2.55
Trav3-1Q5R1I8 Gm26500-201ENSMUST00000101867 106 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm45403-201ENSMUST00000209453 276 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm23039-201ENSMUST00000083870 161 ntBASIC-0.89□□□□□ -2.55
Trav3-1Q5R1I8 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.9□□□□□ -2.55
Trav3-1Q5R1I8 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC-0.9□□□□□ -2.55
Trav3-1Q5R1I8 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.9□□□□□ -2.55
Trav3-1Q5R1I8 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.9□□□□□ -2.55
Trav3-1Q5R1I8 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.9□□□□□ -2.55
Trav3-1Q5R1I8 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.9□□□□□ -2.55
Trav3-1Q5R1I8 Mir133a-1-201ENSMUST00000083465 68 ntBASIC-0.9□□□□□ -2.55
Trav3-1Q5R1I8 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Gm24595-201ENSMUST00000122501 110 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 AC154994.1-201ENSMUST00000217395 302 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 AC155712.1-201ENSMUST00000219704 160 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC-0.91□□□□□ -2.56
Trav3-1Q5R1I8 Mir701-201ENSMUST00000102208 109 ntBASIC-0.92□□□□□ -2.56
Trav3-1Q5R1I8 Gm13560-201ENSMUST00000121865 329 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 76,532 protein–RNA pairs in 246 ms