Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Usp28Q5I043 Gm23267-201ENSMUST00000178490 132 ntBASIC1.04□□□□□ -2.24
Usp28Q5I043 Gm34139-201ENSMUST00000196166 294 ntBASIC1.04□□□□□ -2.24
Usp28Q5I043 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.04□□□□□ -2.24
Usp28Q5I043 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.04□□□□□ -2.24
Usp28Q5I043 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.04□□□□□ -2.24
Usp28Q5I043 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.04□□□□□ -2.24
Usp28Q5I043 Gm22306-201ENSMUST00000082692 107 ntBASIC1.04□□□□□ -2.24
Usp28Q5I043 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm12797-201ENSMUST00000118645 273 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm13560-201ENSMUST00000121865 329 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm26038-201ENSMUST00000158151 106 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm22164-201ENSMUST00000158413 106 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm23581-201ENSMUST00000158531 63 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm43602-201ENSMUST00000196772 300 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm9251-201ENSMUST00000197202 628 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm43199-201ENSMUST00000200019 307 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm24460-201ENSMUST00000082731 106 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm23451-201ENSMUST00000083328 122 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm25627-201ENSMUST00000084003 153 ntBASIC1.03□□□□□ -2.24
Usp28Q5I043 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Usp28Q5I043 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Usp28Q5I043 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.02□□□□□ -2.25
Usp28Q5I043 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Mir5104-201ENSMUST00000175319 94 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Gm25024-201ENSMUST00000179667 104 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Usp28Q5I043 Mir6540-201ENSMUST00000184886 108 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.02□□□□□ -2.25
Usp28Q5I043 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Snord96a-201ENSMUST00000082791 81 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Snora19-201ENSMUST00000082962 132 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Gm23658-201ENSMUST00000083233 132 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Gm10222-201ENSMUST00000088336 294 ntBASIC1.02□□□□□ -2.25
Usp28Q5I043 Gm22784-201ENSMUST00000104088 132 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Usp28Q5I043 Gm12449-201ENSMUST00000117572 234 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Gm26287-201ENSMUST00000158887 81 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Gm23967-201ENSMUST00000175062 78 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Gm16399-201ENSMUST00000181423 219 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Mir6962-201ENSMUST00000199512 63 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Snord1a-201ENSMUST00000083160 74 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Gm24453-201ENSMUST00000083346 76 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Gm25683-201ENSMUST00000083940 131 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Mir490-201ENSMUST00000093567 84 ntBASIC1.01□□□□□ -2.25
Usp28Q5I043 Gm22477-201ENSMUST00000122569 316 ntBASIC1□□□□□ -2.25
Usp28Q5I043 Gm23898-201ENSMUST00000158111 103 ntBASIC1□□□□□ -2.25
Usp28Q5I043 Gm24942-201ENSMUST00000158328 114 ntBASIC1□□□□□ -2.25
Usp28Q5I043 Gm25750-201ENSMUST00000175483 112 ntBASIC1□□□□□ -2.25
Usp28Q5I043 Gm27587-201ENSMUST00000185116 163 ntBASIC1□□□□□ -2.25
Usp28Q5I043 Gm23299-201ENSMUST00000082708 79 ntBASIC1□□□□□ -2.25
Usp28Q5I043 Gm23377-201ENSMUST00000082943 126 ntBASIC1□□□□□ -2.25
Usp28Q5I043 Gm24494-201ENSMUST00000083804 81 ntBASIC1□□□□□ -2.25
Usp28Q5I043 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1□□□□□ -2.25
Usp28Q5I043 Gm16032-201ENSMUST00000118534 168 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm14792-201ENSMUST00000119725 258 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm11334-201ENSMUST00000121969 156 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm23106-201ENSMUST00000157554 101 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm24392-201ENSMUST00000158136 103 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm23113-201ENSMUST00000158477 99 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm26213-201ENSMUST00000158582 110 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm23194-201ENSMUST00000158813 105 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm24667-201ENSMUST00000158938 103 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm22403-201ENSMUST00000174919 84 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Mir3061-201ENSMUST00000175129 91 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm27326-201ENSMUST00000183504 95 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.99□□□□□ -2.25
Usp28Q5I043 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.99□□□□□ -2.25
Usp28Q5I043 Gm24375-201ENSMUST00000104397 132 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Gm22101-201ENSMUST00000157928 103 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Gm23665-201ENSMUST00000158054 62 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Gm25768-201ENSMUST00000158570 98 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Gm22929-201ENSMUST00000175517 107 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Gm22129-201ENSMUST00000179034 107 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Gm23571-201ENSMUST00000180073 127 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Mir7665-201ENSMUST00000184907 63 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.98□□□□□ -2.25
Usp28Q5I043 Gm23679-201ENSMUST00000083161 119 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Mir34a-201ENSMUST00000083559 102 ntBASIC0.98□□□□□ -2.25
Usp28Q5I043 Gm24423-201ENSMUST00000101982 106 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Mir669l-201ENSMUST00000103771 98 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm22785-201ENSMUST00000104087 132 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm25111-201ENSMUST00000116686 147 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm14923-201ENSMUST00000118270 155 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm11388-201ENSMUST00000120908 159 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm24909-201ENSMUST00000157290 280 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm25663-201ENSMUST00000157698 135 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm26482-201ENSMUST00000158015 62 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm23419-201ENSMUST00000175523 84 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm25235-201ENSMUST00000179933 107 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Mir6336-201ENSMUST00000183581 130 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 Gm38019-201ENSMUST00000195133 380 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.97□□□□□ -2.25
Usp28Q5I043 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 164.4 ms