Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm25253-201ENSMUST00000179958 107 ntBASIC-1.61□□□□□ -2.67
Ccdc88bQ4QRL3 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC-1.62□□□□□ -2.67
Ccdc88bQ4QRL3 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.62□□□□□ -2.67
Ccdc88bQ4QRL3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC-1.62□□□□□ -2.67
Ccdc88bQ4QRL3 AC153541.1-201ENSMUST00000213786 294 ntBASIC-1.62□□□□□ -2.67
Ccdc88bQ4QRL3 AC192334.2-201ENSMUST00000223087 1091 ntBASIC-1.62□□□□□ -2.67
Ccdc88bQ4QRL3 Gm25855-201ENSMUST00000082787 72 ntBASIC-1.62□□□□□ -2.67
Ccdc88bQ4QRL3 Mir767-201ENSMUST00000103256 107 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm43993-201ENSMUST00000203972 247 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm44857-201ENSMUST00000208331 196 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm23975-201ENSMUST00000082685 106 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm22030-201ENSMUST00000116942 63 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm24909-201ENSMUST00000157290 280 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm23535-201ENSMUST00000157542 106 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm25444-201ENSMUST00000158999 113 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Mir376b-201ENSMUST00000195930 82 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm10172-201ENSMUST00000085929 558 ntBASIC-1.63□□□□□ -2.67
Ccdc88bQ4QRL3 Gm26384-201ENSMUST00000102183 110 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Gm24481-201ENSMUST00000157210 102 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Gm22435-201ENSMUST00000158552 128 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Gm18185-201ENSMUST00000186725 667 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Gm44665-201ENSMUST00000205381 251 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Gm19885-201ENSMUST00000212853 343 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Mir155-201ENSMUST00000083463 65 ntBASIC-1.64□□□□□ -2.67
Ccdc88bQ4QRL3 Gm22771-201ENSMUST00000104449 91 ntBASIC-1.65□□□□□ -2.67
Ccdc88bQ4QRL3 Gm12016-201ENSMUST00000119079 681 ntBASIC-1.65□□□□□ -2.67
Ccdc88bQ4QRL3 Gm13475-201ENSMUST00000119290 234 ntBASIC-1.65□□□□□ -2.67
Ccdc88bQ4QRL3 Gm17906-201ENSMUST00000202480 901 ntBASIC-1.65□□□□□ -2.67
Ccdc88bQ4QRL3 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.66□□□□□ -2.68
Ccdc88bQ4QRL3 Gm25598-201ENSMUST00000179031 107 ntBASIC-1.66□□□□□ -2.68
Ccdc88bQ4QRL3 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC-1.66□□□□□ -2.68
Ccdc88bQ4QRL3 AC159246.1-201ENSMUST00000214478 249 ntBASIC-1.66□□□□□ -2.68
Ccdc88bQ4QRL3 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC-1.66□□□□□ -2.68
Ccdc88bQ4QRL3 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
Ccdc88bQ4QRL3 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC-1.67□□□□□ -2.68
Ccdc88bQ4QRL3 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.67□□□□□ -2.68
Ccdc88bQ4QRL3 Gm18667-201ENSMUST00000186523 484 ntBASIC-1.67□□□□□ -2.68
Ccdc88bQ4QRL3 Gm23453-201ENSMUST00000083326 106 ntBASIC-1.67□□□□□ -2.68
Ccdc88bQ4QRL3 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.67□□□□□ -2.68
Ccdc88bQ4QRL3 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-1.67□□□□□ -2.68
Ccdc88bQ4QRL3 Gm12770-201ENSMUST00000121734 462 ntBASIC-1.68□□□□□ -2.68
Ccdc88bQ4QRL3 Gm23641-201ENSMUST00000157857 101 ntBASIC-1.68□□□□□ -2.68
Ccdc88bQ4QRL3 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.68□□□□□ -2.68
Ccdc88bQ4QRL3 Gm24085-201ENSMUST00000175172 116 ntBASIC-1.68□□□□□ -2.68
Ccdc88bQ4QRL3 Gm28414-201ENSMUST00000190111 294 ntBASIC-1.68□□□□□ -2.68
Ccdc88bQ4QRL3 Gm28992-201ENSMUST00000190534 139 ntBASIC-1.68□□□□□ -2.68
Ccdc88bQ4QRL3 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.68□□□□□ -2.68
Ccdc88bQ4QRL3 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-1.68□□□□□ -2.68
Ccdc88bQ4QRL3 AC147633.1-201ENSMUST00000225134 259 ntBASIC-1.68□□□□□ -2.68
Ccdc88bQ4QRL3 Gm26158-201ENSMUST00000158973 119 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm37338-201ENSMUST00000191986 127 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm18971-201ENSMUST00000197240 374 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm22063-201ENSMUST00000082560 107 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm11798-201ENSMUST00000119150 421 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm14766-201ENSMUST00000121689 367 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm23917-201ENSMUST00000175256 98 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Snora26-201ENSMUST00000175614 121 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Mir6377-201ENSMUST00000183760 114 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm44337-201ENSMUST00000196553 114 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 AC141438.3-201ENSMUST00000215632 202 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm22747-201ENSMUST00000082495 107 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm22652-201ENSMUST00000083207 131 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Mir19a-201ENSMUST00000083482 82 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm25008-201ENSMUST00000083809 81 ntBASIC-1.69□□□□□ -2.68
Ccdc88bQ4QRL3 Gm37630-201ENSMUST00000194210 1456 ntBASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Gm26501-201ENSMUST00000178307 107 ntBASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Gm24565-201ENSMUST00000180099 107 ntBASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Gm9227-201ENSMUST00000194733 566 ntBASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Gm24966-201ENSMUST00000082443 79 ntBASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Gm23103-201ENSMUST00000083725 107 ntBASIC-1.7□□□□□ -2.68
Ccdc88bQ4QRL3 Mir547-201ENSMUST00000102051 78 ntBASIC-1.71□□□□□ -2.68
Ccdc88bQ4QRL3 Gm42721-201ENSMUST00000197165 1523 ntBASIC-1.71□□□□□ -2.68
Ccdc88bQ4QRL3 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.72□□□□□ -2.68
Ccdc88bQ4QRL3 Gm44865-201ENSMUST00000207240 531 ntBASIC-1.72□□□□□ -2.68
Ccdc88bQ4QRL3 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC-1.72□□□□□ -2.68
Ccdc88bQ4QRL3 AC167977.2-201ENSMUST00000225676 682 ntBASIC-1.72□□□□□ -2.68
Ccdc88bQ4QRL3 Gm24043-201ENSMUST00000083108 116 ntBASIC-1.72□□□□□ -2.68
Ccdc88bQ4QRL3 Mir34a-201ENSMUST00000083559 102 ntBASIC-1.72□□□□□ -2.68
Ccdc88bQ4QRL3 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.72□□□□□ -2.68
Ccdc88bQ4QRL3 Mir451a-201ENSMUST00000093557 72 ntBASIC-1.72□□□□□ -2.68
Ccdc88bQ4QRL3 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.73□□□□□ -2.69
Ccdc88bQ4QRL3 Gm20543-201ENSMUST00000174200 726 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 76,532 protein–RNA pairs in 221.4 ms