Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Gm34139-201ENSMUST00000196166 294 ntBASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Gm22358-201ENSMUST00000082877 122 ntBASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Gm25188-201ENSMUST00000083913 122 ntBASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Gm23836-201ENSMUST00000104434 129 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Gm25825-201ENSMUST00000157091 124 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Gm25424-201ENSMUST00000157612 58 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Gm25184-201ENSMUST00000157753 163 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Gm44325-201ENSMUST00000196757 77 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Gm42719-201ENSMUST00000197393 355 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Gm23423-201ENSMUST00000082782 106 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Gm24038-201ENSMUST00000082872 159 ntBASIC1.25□□□□□ -2.21
Trafd1Q3UDK1 Mir653-201ENSMUST00000102402 85 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm14536-201ENSMUST00000118324 138 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm12432-201ENSMUST00000119540 186 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm15027-201ENSMUST00000120922 138 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm24006-201ENSMUST00000158462 132 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Snora15-201ENSMUST00000177461 131 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Mir7063-201ENSMUST00000184158 91 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm27517-201ENSMUST00000184347 236 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm28537-201ENSMUST00000189026 315 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm29631-201ENSMUST00000191065 315 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm29014-201ENSMUST00000191422 326 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm24453-201ENSMUST00000083346 76 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.24□□□□□ -2.21
Trafd1Q3UDK1 Gm11936-201ENSMUST00000118323 160 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm25720-201ENSMUST00000157503 105 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm23665-201ENSMUST00000158054 62 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm22258-201ENSMUST00000177645 94 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm26032-201ENSMUST00000178535 94 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm22862-201ENSMUST00000178593 121 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm25210-201ENSMUST00000178813 94 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm25157-201ENSMUST00000178914 94 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm22046-201ENSMUST00000179027 94 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm22941-201ENSMUST00000179630 94 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm25471-201ENSMUST00000180126 94 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm42855-201ENSMUST00000197388 253 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm25409-201ENSMUST00000083764 131 ntBASIC1.23□□□□□ -2.21
Trafd1Q3UDK1 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Gm24385-201ENSMUST00000122694 350 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Gm23466-201ENSMUST00000157133 106 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Gm23760-201ENSMUST00000158350 116 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Gm24154-201ENSMUST00000175261 130 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Mir7052-201ENSMUST00000184821 65 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Mir7059-201ENSMUST00000184825 59 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Gm44483-201ENSMUST00000197203 97 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Gm44989-201ENSMUST00000204749 217 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 mt-Td-201ENSMUST00000082404 70 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Gm22980-201ENSMUST00000082608 70 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Gm24261-201ENSMUST00000083744 104 ntBASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Trafd1Q3UDK1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Gm12686-201ENSMUST00000120546 397 ntBASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Gm22559-201ENSMUST00000157329 134 ntBASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Gm22485-201ENSMUST00000157990 109 ntBASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Gm23571-201ENSMUST00000180073 127 ntBASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Mir6375-201ENSMUST00000197176 95 ntBASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trafd1Q3UDK1 Gm25759-201ENSMUST00000103988 129 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm23841-201ENSMUST00000116951 114 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm26156-201ENSMUST00000116999 123 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm24677-201ENSMUST00000158755 150 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm24229-201ENSMUST00000158830 118 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm26092-201ENSMUST00000179798 97 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm25936-201ENSMUST00000179952 114 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm27585-201ENSMUST00000183717 199 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm27402-201ENSMUST00000183890 120 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm24624-201ENSMUST00000082617 164 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Mir211-201ENSMUST00000083651 106 ntBASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
Trafd1Q3UDK1 Gm22545-201ENSMUST00000104350 132 ntBASIC1.19□□□□□ -2.22
Trafd1Q3UDK1 Gm11857-201ENSMUST00000119817 324 ntBASIC1.19□□□□□ -2.22
Trafd1Q3UDK1 Gm28020-201ENSMUST00000157739 67 ntBASIC1.19□□□□□ -2.22
Trafd1Q3UDK1 Gm25718-201ENSMUST00000158632 118 ntBASIC1.19□□□□□ -2.22
Trafd1Q3UDK1 Gm23194-201ENSMUST00000158813 105 ntBASIC1.19□□□□□ -2.22
Trafd1Q3UDK1 Gm23636-201ENSMUST00000175070 95 ntBASIC1.19□□□□□ -2.22
Trafd1Q3UDK1 Gm37715-201ENSMUST00000193206 235 ntBASIC1.19□□□□□ -2.22
Trafd1Q3UDK1 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms